Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_002817.1 Length=2767 Score E Sequences producing significant alignments: (Bits) Value seq19028 277 3e-71 >seq19028 Length=31091 Score = 277 bits (306), Expect = 3e-71 Identities = 493/713 (69%), Gaps = 20/713 (3%) Strand=Plus/Plus Query 1655 ATTCTTCGCCTCTTCTAGGAATTCTCTATATGAGGATGTTGGGCCTGGATTGCAGAGGAA 1714 ||| || |||| || ||||| ||| |||| ||| || || || |||||||| | ||| Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1715 GATAGTGGGAATGCCGCC-TTTAACTTGAATTGGCTTTCCGTATTTTGTGTTGCTTTGCC 1773 ||| || || || || || |||| ||| | ||| ||||||||||| ||||| || Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACA-GGCCTTCCGTATTTTACCTTGCTGGACC 13945 Query 1774 AGTCCCTTTGGGCCCCAAAGAATTCCTTCCAGTGCTTTAGATAATGCGGATCAACATCAT 1833 | | ||||||||||| | || || || |||||||||||||||||||||| || | || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTAT 14005 Query 1834 CAATGACGTTATACCATGCGTCATTAGAATATACTTTTGGACTTAAGTCTAAATGACCAC 1893 |||||| ||||||||| || | ||| ||||| | ||| | | || ||||||||||| | Sbjct 14006 CAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGC 14065 Query 1894 ATAAGTAATTATGTGGCCCTAATGACCTAGCCCAAATAGTTTTGCCGGTACGACTATCGC 1953 ||| |||||||||||| ||||| || || ||||| || || || || | | || | Sbjct 14066 ATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCAC 14125 Query 1954 CTTCTATTACAATACTATTGGG-CCTCCAAGGCCGCGCAGCGGCACCACACACATTCTCA 2012 | || || |||||||| ||||| | | | ||||||||||||||| | | ||||| ||| Sbjct 14126 CCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCA 14185 Query 2013 GAGACCCACCCTTCAAGTTCCTCAGGGACTTGATCAAAAGAAGAAGAAGAGAAAGGAGAA 2072 | |||| | |||| ||| | || |||||| || |||||| | Sbjct 14186 GCTGCCCAGCACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTA 14231 Query 2073 ATATAAGGCTCTGGGGGAGCCTGGAAAATCCTATCTAAATTAGTCTTTAAATTATGATAC 2132 | |||||| || || || | | ||| || | |||||| || | || ||||||||| Sbjct 14232 ACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 2133 TGAAAAATAAAATCTTTAGGGAGTTTTTCCCTAATAATAGCCATAGCTGCTTCAGCGGAA 2192 ||||| | ||| | | || | |||||| |||||||||| | ||| ||||| || Sbjct 14292 TGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGAT 14351 Query 2193 CCTGCGTTTAAAGCGTCGGCGCATGCGTCGTTAGCATTCTGGCAGCCTCCTCTAGCACTT 2252 || |||| || || || || | || || | | || | |||||||||||| | Sbjct 14352 GTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGAT 14411 Query 2253 CGTCCGTCGACCTGGAATTCTCCCCATTCAAGTGT-GTCTCCATCCTTGTCGATGTAGGA 2311 ||||| |||| || || | ||||| || |||| || | || || ||||||| Sbjct 14412 CGTCCATCGATTTGAAAATTGCCCCAGTC-GGTGTAATCACAGTCTTTCGCGATGTATTT 14470 Query 2312 CTTGACGTCGGAGCTTGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTG 2364 ||| || || || ||||||||| || | |||||| ||| ||||| || Sbjct 14471 CTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG 14522 Score = 194 bits (214), Expect = 3e-46 Identities = 368/539 (68%), Gaps = 31/539 (6%) Strand=Plus/Plus Query 966 GAATCATACGGAGAATGCTTTATTATTGTATATGGCATGTACACATGCCTCTAACCCTGT 1025 || |||||| || ||||| ||| |||||||| | || ||||| ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1026 ATATGCAAGTCTAAAGATACGAATGTATTTCTATGATTCAGTATCGAATTAATAAAGTTT 1085 |||| | | | | | ||| | ||||| ||||| ||||| |||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1086 GAATTTTATTATATGATATTCGTGTACATCGATTGTTCCATCTAATACATCATACAATAC 1145 |||||||||| ||||||||| ||||||| | |||| || | ||||| | ||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1146 ATGTGCTACTGCTCTAATTACATTATTAAGCGTAATGACACCTAAATTATCCAAATACTT 1205 || |||| |||||||| | ||| |||| |||| |||||||| || ||| | || Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1206 TAGGACTTGTGTCCTAAATACTCTTAAGAAATGACCAA--TCAGAGGCTGTAAGGTCGTC 1263 | || | ||||||||||||||||| || | || |||| |||| ||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAA--ACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1264 CAGACCTGGAAGTTCAGAAAACATTTGTGAATCCCCAATGCCTTCCTGAGGTTGTAGTTG 1323 | || || |||||| || ||| |||||||| || | ||||||| ||||||| |||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1324 AATCGTATTTGAAGGTGTATGATGTCGTAATTCTTGAA--GAACGGTCTTATGTGGTGTT 1381 ||||| ||||| | | || |||||| || | ||| ||||| | | ||| | Sbjct 13435 AATCGAATTTGTATTTCGATTATGTCG--GTTGTCGAATTTGTTGGTCTGAGATTGTGGT 13492 Query 1382 TGGTTATCTTGAAATAAAG-CGGATTTGTTATCTCCC-------------AGGTAA---- 1423 || ||||||||||| || | | ||| |||| | |||| Sbjct 13493 TGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGA 13552 Query 1424 --AAACGCCATTCTGAGCTTGATGCGCAGTGATGTCTTCCCCTGTGCGTAAATCCATGA 1480 | ||||||||| ||||| || |||||||||| |||||||||||||| |||||||| Sbjct 13553 CTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGA 13611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8739161063740