Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_002981.1 Length=2748 Score E Sequences producing significant alignments: (Bits) Value seq19028 269 5e-69 >seq19028 Length=31091 Score = 269 bits (298), Expect = 5e-69 Identities = 452/653 (69%), Gaps = 23/653 (4%) Strand=Plus/Plus Query 1602 GCATTCTTCAGAGCCCAGTTTTTAAGCGCACTGTTTTTCTCTTCATCCAGATACTCTTTA 1661 ||||| | || || ||| ||||| | | | ||||| || || || || |||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1662 TAGCTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGA 1721 ||||| ||| | || || |||||||| | |||||| || || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1722 ACAGGTTTCCCGTACTTGGTGTTGCTTTGCCAGTCTCTTTGGGCCCCCATGAACTCTTTA 1781 ||||| | ||||| || ||||| ||| | |||||||||||||| ||||||||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTA 13974 Query 1782 AAGTGCTTTAGATAGTGCGGATCGACGTCATCAATGACGTTATACCAGGCATCATTACTG 1841 |||||||||||||| ||||||||||||| |||||||| |||||||||||||| ||| Sbjct 13975 AAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAA 14034 Query 1842 TACACTTTTGGACTCAGGTCGAGATGACCGCACAAATAATTGTGTGGTCCTAGTGACCTG 1901 || | ||| | ||| || | ||||||||| | ||||| |||||||||| || || Sbjct 14035 TAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTT 14094 Query 1902 GCCCACATTGTTTTTCCGGTACGACTATCACCCTCAATTACAATACTAATGGG-CCTGAT 1960 |||||| ||| || || || | | ||||||||||| |||||||| |||| | | | Sbjct 14095 GCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAA 14154 Query 1961 AGGCCGCGCAGCGGCACTGACAACGTTTTCACATGCCCACTCTTCAAGTTCTTCTGGAAC 2020 ||||||||||||||| ||| |||||| |||||| |||| Sbjct 14155 TGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA------------- 14201 Query 2021 TTGGTCGAAAGAAGAAGATAAAAAAGGGGAAACATAAACCTCCATTGGAGGTGTAAAAAT 2080 | || ||| |||||| | |||||| ||||||| || || || | || || Sbjct 14202 -TTGTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATAT 14260 Query 2081 CCTATCTAAATTTGAATTTAAGTTATGAAATTGTAAAACAAAATCTTTGGGAGC----TT 2136 | |||||| |||| | || |||||| |||| ||| | || ||||| || || Sbjct 14261 TCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCATTTTT 14318 Query 2137 TCTCTTTTAATATATTGAGGGCCTGTGCTTTTGACCCTGAATTGATTGCCTCGGCATATG 2196 ||||| ||||| | || || | | | |||| | | | | || || ||| || Sbjct 14319 TCTCTAATAATAGA--AAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATA 14376 Query 2197 CGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTTCCATCGACTTGGAAA 2249 | || || | | || ||||||||||||| |||| |||||||| ||| ||| Sbjct 14377 CATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAA 14429 Score = 185 bits (204), Expect = 2e-43 Identities = 277/389 (71%), Gaps = 11/389 (3%) Strand=Plus/Plus Query 948 GAATCATAGTGAGAATGCTTTGATGTTGTATATGGCGTCTACGCACGCCTCTAATCCTGT 1007 || ||||| ||| ||||| ||| |||||||| || || || || ||||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1008 GTATGCTACATTGAAGATACGGATCTATTTTTATGATTCTGTATCTAATTAATAAATATT 1067 ||| ||| ||| | ||| | ||||||||||| |||||| |||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1068 GAATTTTATTGAATGTGATTGTTCAACGTACAA--AATGT--GATGCAATACATCCCATA 1123 |||||||||| ||| ||| ||| ||||| | ||| | | | ||||| ||| Sbjct 13197 GAATTTTATTTCATGATATT---CAA-GTACATCCACTGTTTGCTCAATTACATTGAATA 13252 Query 1124 AAACATGATCTACTGCTCTAATTACATTGTTTAAACTAATAACCCCTAAACTATCTAAAT 1183 | |||| ||||| |||||||| | |||||| | ||||||||| ||||| | |||||| Sbjct 13253 ATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAA 13312 Query 1184 ATTTAAGTGCTTGGTTCTTAAAGACCCTTAAGAAACGACCAGTCTGAGGTTGTGAAGTCA 1243 |||| | | | | ||||| || ||||||||| ||| |||| || || Sbjct 13313 ATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAG 13372 Query 1244 TCCAGATTCGGAAGATTAGAAAACACTTGTGAATCCCCAATGCCTTCCTCAGGTTGTGAT 1303 ||| ||| |||| | || ||| ||||||| || | |||||||||||||||| | Sbjct 13373 TCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGT 13432 Query 1304 TGAATTGGATCTGCATTGTGATTATGTCG 1332 ||||| | || || ||| |||||||||| Sbjct 13433 TGAATCGAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8681674335052