Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_002984.1 Length=2632 Score E Sequences producing significant alignments: (Bits) Value seq19028 158 2e-35 >seq19028 Length=31091 Score = 158 bits (174), Expect = 2e-35 Identities = 225/314 (72%), Gaps = 11/314 (4%) Strand=Plus/Plus Query 1569 CCTGGATTGCACAGCACGATTGATGGGATTCCTCCTTTAATTTGAACTGGCTTTCCATAT 1628 || |||||||||| | ||||| || || || || || || | || ||| |||| ||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1629 TTACAGTTGGACTG--CCAATCCCTTTGGGCCCCTATCAATTCTTTCCAGTGCTTTAGCT 1686 || ||| ||| ||||| ||||||||||| || || ||||| ||| ||| Sbjct 13930 TTTACCTTG--CTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGT------GCT 13981 Query 1687 TTAGGTATTGCGGAGCGACGTCATCAATGACGTTATATTCGGCTTCGTTTGAGTAAACCC 1746 |||| || |||||| |||||| |||||||| |||||| ||| | ||||| |||| Sbjct 13982 TTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTT 14041 Query 1747 TAGAATTGAAATCCAGGTGACCGCTAAGATAATTGTGCTTGCCTAACGAACGGGACCACA 1806 || ||| ||||| | ||||||| || ||||| || ||||| || | | |||| Sbjct 14042 TATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACT 14101 Query 1807 TCGTCTTCCCCGTTCTTGAGTCACCTTCTATGATTATACTTCTAGCTCG-CATTGGCCGC 1865 |||||||| ||||| || ||||| || |||| ||||| | | ||| | ||||||| Sbjct 14102 CTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGC 14161 Query 1866 GCAGCGGCATCCCT 1879 |||||||||||||| Sbjct 14162 GCAGCGGCATCCCT 14175 Score = 129 bits (142), Expect = 1e-26 Identities = 270/392 (69%), Gaps = 34/392 (9%) Strand=Plus/Plus Query 858 TCATACTGAGAACGCTTTGTTATTGTATATGGCATGTACGCATGCCTCTAACCCCGTGTA 917 ||||||||| || || ||||| |||||| | || ||||| ||||| || || || Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 918 TGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAATAAAATTTGAA 977 | || ||| || || | ||||||||||| || |||||||||||| ||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 978 TTTTATATCATGATTTTCGAGTACAT----AGTTTACATATGGTTTATCAGTTGCA-AAT 1032 |||||| ||||||| ||| ||||||| |||| | | ||| || ||| | ||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGC---TCAATTA-CA-TTGAATAAT 13254 Query 1033 ACA------ACAGCTCGTATTACATTATTCAGTCCAACAACACCTAATCTATCTAAA--- 1083 ||| ||||||| || | ||| || | | || ||||||||||| |||||| Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1084 TACAGAAGCACTAAATGTTTAAACCATTTTA--AATAAGT-CGTCCCAGAAACTTGACGT 1140 | || | ||| ||| |||||| | ||| || | || ||| || ||||| Sbjct 13315 TTCATTA-CACGAAA--TTTAAATACTCTTAAGAAAACGTATGTCGGAG------GACGT 13365 Query 1141 AATGTCGTCCAGATTTGGAAGTTCAGGAATGCTTTGTGAAGATTTAGTGCTCTCCTGAGG 1200 || |||| ||| | |||||| ||||| |||||||||||||| ||| | |||| ||| Sbjct 13366 AAACGAGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGG 13425 Query 1201 TTGTGGTTGAATCTGATCTGGATGTGGAATAT 1232 ||||||||||||| || || || | || ||| Sbjct 13426 TTGTGGTTGAATCGAATTTGTATTTCGATTAT 13457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8310607930164