Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003418.1 Length=2741 Score E Sequences producing significant alignments: (Bits) Value seq19028 230 4e-57 >seq19028 Length=31091 Score = 230 bits (254), Expect = 4e-57 Identities = 486/717 (68%), Gaps = 30/717 (4%) Strand=Plus/Plus Query 1631 TTCTTTTCCTCGTCTAAAAACTCTTTATAGCTTGCGTTGGGGCCTGGATTGCAGAGGAAG 1690 || |||||||| || | |||||||||||||| | | || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1691 ATTGTTGGAATGCCTCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTG-CCA 1749 ||||| || || || || || || | || ||| | ||||| ||| || | | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT-GCTGGACCA 13946 Query 1750 GTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGTTTCAGATAATGCGGGTCAACATCATC 1809 | |||||||||||||| || ||||||||||| || ||||||||||| || || | ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1810 TATAATGTTGAACCACGCATCGTTTGAATACACTTTAGGGCTTAGATCCAAGTGCCCACA 1869 || ||||| |||| |||| |||||||| | |||| | | ||| || || || || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1870 TAAATAATTATGTGGCCCCAAGGAACGGGCCCATTGTGTTTTCCCAGTTCTAGACTCCCC 1929 || ||||||||||| || || || | ||||| | ||| ||||| ||||||||||| || Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1930 CTCTAGAACTAAACTCAAAGGTCTCTGA-GGCCGCGCAGCGGCGTCCATGACGTTCTCCG 1988 ||| | || | |||| |||| | | |||||||||||||| ||| | || || || | Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAG 14186 Query 1989 ACGCCCACTCTTCAAGTTCTTCTGGAACTTGATCAAAAGAAGAAGATAAAAATGGACAAA 2048 ||||| |||| ||| | || |||||| | ||| |||| || Sbjct 14187 CTGCCCAGCACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTAA 14232 Query 2049 CATAAACCTCCTGAGGAGGAGTAAAAATCCTATCTAAATTTGAATTTAAATTATGATATT 2108 ||||| || |||| || | || || | |||||| |||| | || ||||||||||| Sbjct 14233 CATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATT 14292 Query 2109 GTAAGACATAATCTTTGGGGGC--TAATTCTTTAAGAACTCTAAGAGCCTCTGCCTTACT 2166 | | | | || ||||| ||| | |||| ||| || ||| || ||| | | | Sbjct 14293 G--AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCT---TCAAT 14347 Query 2167 TCCTGT----GTTAAGTGCTGCCGCGTAAGCGTCATTGGCTGATTGTTGTCCTCCCCTTG 2222 | ||| |||| ||| | || | | ||||| | || ||| ||||| || | Sbjct 14348 TGATGTAGCACTTAA-CGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAG 14406 Query 2223 CAGATCTGCCGTCGATCTGGAATTCCCCCCATTCAAGGGTATCTCCGTCCTTGTCGATAT 2282 |||||| || ||||| || || | ||||| || | ||| | ||| || |||| | Sbjct 14407 CAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGT 14466 Query 2283 AGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTG 2339 | ||| || || || |||||||| || | |||||| ||| ||||| || Sbjct 14467 ATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG 14522 Score = 98.7 bits (108), Expect = 2e-17 Identities = 286/440 (65%), Gaps = 8/440 (2%) Strand=Plus/Plus Query 939 GAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCAGT 998 || ||| || || ||||||||| || ||||| || || ||||| ||| || || Sbjct 13080 GACTCATACTGAAAATGCATTGTTG---TATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 999 GTATGCTACGCTTAAGATTCGGATTTATTTTTATGACTCTGTAACGAATTGAATTAATAA 1058 ||| ||| | | | || | |||||||||||| |||| | |||| ||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATT-----AATAA 13191 Query 1059 AGTTTGAATTTTATATCTGAATATTGGTCTACATACATTGTCTGATTAACTACATTGTAC 1118 | ||||||||||| || ||||| ||||| || ||| || | || ||||||| | Sbjct 13192 ATATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAAT 13251 Query 1119 AATACATGTTCGACGGCTTTAATAACTAAATTAAGTGAGATTACACCTAGATTATTGAGA 1178 ||||||| || || ||| |||||| |||| || ||||||| | | | Sbjct 13252 AATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAA 13311 Query 1179 TATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTC 1238 |||| | || | ||| ||||| |||||||||| |||||||| |||| Sbjct 13312 AATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGA 13371 Query 1239 GTCCAGATTCGGAAGGTTAGAAAACACTTGTGTATTCCCAGAGCTTTCCGTAGGTTGTAG 1298 |||| ||| |||| | || ||| ||||| | ||| | |||| ||||||| | Sbjct 13372 GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGG 13431 Query 1299 TTGAAATGGATCCTGAGTGTTATTATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGG 1358 ||||| | || | | |||||||| | ||| | ||| | | | |||| Sbjct 13432 TTGAATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGG 13491 Query 1359 TTGAGGATCTTGAAATAGAG 1378 ||||||||||||||||| || Sbjct 13492 TTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8659282396826