Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003609.1 Length=2757 Score E Sequences producing significant alignments: (Bits) Value seq19028 192 1e-45 >seq19028 Length=31091 Score = 192 bits (212), Expect = 1e-45 Identities = 250/344 (73%), Gaps = 4/344 (1%) Strand=Plus/Plus Query 1829 GACGTTGGGCCTGGATTGCAGAGGAAGATTGTTGGGATACCACCTTTAATTTGAATTGGT 1888 || || || || |||||||| | ||||||||| || || ||||| || || | | || Sbjct 13861 GAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGC 13920 Query 1889 TTCCCGTACTTGGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGC 1948 | ||||| || ||||| ||| | |||||||||||||| ||||||||||||||| Sbjct 13921 CTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGC 13980 Query 1949 TTTAGATAGTGGGGATCCACGTCATCAATGACGTTGTACCATGCCTCGTTGCTGTAAACC 2008 |||||||| || ||||| |||| |||||||| ||| ||||| || | || |||| Sbjct 13981 TTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATT 14040 Query 2009 TTGGGGCTTAAGTCAAGGTGGCCGCAAAGGTAATTATGACGTGGATGTAGAGACCTGGCC 2068 || | || || | || ||||| |||||||||| |||| || ||| || ||| Sbjct 14041 TTATTATTCAAATCTAAATGACCGCATAGGTAATTAT---GTGGTCCTAAAGATCTTGCC 14097 Query 2069 CACATGGTCTTCCCTGTCCTGCTATCCCCCTCTATCACAATACTCATGGG-CCTCCACGG 2127 ||| ||||||||||| || || ||||| || ||||||||| |||| | | | || Sbjct 14098 CACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGG 14157 Query 2128 CCGCGCAGCGGAATCCCTGACGTTCTCGGCAGCCCATTCCTCAA 2171 ||||||||||| |||||| || || || || ||||| ||||| Sbjct 14158 CCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA 14201 Score = 132 bits (146), Expect = 8e-28 Identities = 262/382 (69%), Gaps = 7/382 (2%) Strand=Plus/Plus Query 1110 CATACTGAAAATGCTTTGTTATTGTATATGGCCTGTACTCATGCCAGTAATCCAGTGTAT 1169 |||||||||||||| ||||| |||||| | |||||||| |||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1170 GCTACATTGAAAATCAG-AGTGTATTTCTATGATTCAGTACAGAATTAATAAAGCTTGAA 1228 ||| ||| || | ||| ||||| ||||| ||| |||||||||| ||||| Sbjct 13141 TGTACTATGAGAACACGCAGT-TATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1229 TTTTATATCAGTAAATTGTTGTACATACTCTGTTCCATCTAATACATCGTACAATACGTG 1288 |||||| ||| | ||| |||||| | ||||| || | ||||| | | ||||| | Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1289 ATCAACTGCCCTAATTACATTGTTAATTGAAATTACACTCAAATC-ATCTAAATACTTCA 1347 || || || ||||| | ||||||||| ||| |||| | |||| |||||| | |||| Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACAC-CTAATCGGTCTAAAAATTTCA 13318 Query 1348 ACACTTGTGTCCTAAATAAAATTAAGAAATGCGAGGTCTGATGATGTGAGAGAGTCCAAA 1407 || | |||||| |||||||| | ||| || || || | |||||| | Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1408 TCTTGAAAGTCAGGAAGCACTTGTGTAGACCCAGTTGAGATCTGAGATTGTGGTTGAATT 1467 ||||||| | ||||| ||||| ||| ||||| || || |||||||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1468 GGATCTGTGCTGTTATTATGTC 1489 | || ||| | |||||||| Sbjct 13439 GAATTTGTATTTCGATTATGTC 13460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8710463969914