Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003803.1 Length=2800 Score E Sequences producing significant alignments: (Bits) Value seq19028 219 7e-54 >seq19028 Length=31091 Score = 219 bits (242), Expect = 7e-54 Identities = 543/812 (67%), Gaps = 33/812 (4%) Strand=Plus/Plus Query 1689 TTCTTTTCCTCGTCCAGAAACTCTTTATATGATGATGTCGGTCCTGGATTGCATAGGAAG 1748 || |||||||| || || ||||||||||| || || || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1749 ATAGTGGGAATGCCGCCTTTAATTTGAATCGGCTTCCCGTACTTGGTATTGCTTTGCCAG 1808 || || || || || || || || | | ||| | ||||| || ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1809 TCCCTTTGGGCCCCCATGAATTCTTTGAAGTGCTTGAGGTAATGGGGGTCGACGTCATCA 1868 | |||||||||||||| || ||||| |||||||| || ||||| || ||||||| |||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1869 ATGACGTTGTACCATGCGTCGTTGCTGTAAACCTTTGGACTGAGATCCAAATGTCCACAT 1928 |||| ||| ||||| || | || |||| || | | | ||| ||||| || ||| Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1929 AAGTAGTTGTGTGGTCCCAGAGATCGGGCCCACATCGTCTTCCCTGTCCTACTATCGCCC 1988 | ||| || |||||||| | ||||| |||||| ||||||||||| ||| || ||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1989 TCGATGACGATACTACTCGGTC-TCCATGGCCGCGCAGCGAAACCCATCACGTTCTCGGA 2047 || ||||| ||||| | |||| | |||||||||||||| | || | || || || | Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGC 14187 Query 2048 AACCCAGTCTTCAAGTTCCTCAGGAACATGAGTGAAAGAAGAAGAAAGAAAGGGAGAAAT 2107 ||||| || |||| || |||| |||||| || ||| ||| || Sbjct 14188 TGCCCAG----CA-----CTCA-----ATTGTTGAAGGAAGAACAACTAAAAGGACTAAC 14233 Query 2108 ATAAGGAATCGGAGGCTCCTGAAAAATCCTATCTAAATTGCTATTTAAATTATGAAACTG 2167 |||||| ||||| | || || | |||||| || | || ||||||| | || Sbjct 14234 ATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTG 14293 Query 2168 TAAAACAAAATCCTTTG-GGGC--TAGTTCCCGGATTACATTAAGAGCCTCTGTTTTACT 2224 || | ||| ||||| ||| | ||| | || | | ||| || || || | | Sbjct 14294 AAATAGAAA---CTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTC---TTCAAT 14347 Query 2225 TGCT---GCGTTAAGAGCCTTGGCGTAAGCGTCATTGGCGGATTGTTGTCCGCCGCGAGC 2281 || | || | | || | || | | ||||| | | ||| || || | ||| Sbjct 14348 TGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGC 14407 Query 2282 AGATCGTCCGTCGATCTGAAACTCGCCCCATTGGATGGTGTCTCCGTCCTTGTCCAAATA 2341 ||||||||| ||||| ||||| | |||||| | | || || | ||| || | | || Sbjct 14408 AGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTA 14467 Query 2342 GGACTTGACGTCAGAACTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGTTGACCT 2401 ||| || || ||| |||||||| || | |||||| ||| ||||| || | Sbjct 14468 TTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG-CTA 14525 Query 2402 GGAAGGGGAT--ATGAGGTCGAAGAATCGTTGGTTGGTACAATTGT-ACTTGCCCTCGAA 2458 | | |||| |||| |||||| || |||| || |||||| |||||| ||||| Sbjct 14526 GTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTA-AATTGTGCCTTGCCTTCGAA 14584 Query 2459 CTGAATGAGGGCATGCAAATGAGGTTCCCCAT 2490 ||||| |||||||| |||| |||||||| Sbjct 14585 TTGAATAAGGGCATGGCTATGAAATTCCCCAT 14616 Score = 136 bits (150), Expect = 7e-29 Identities = 259/385 (67%), Gaps = 3/385 (1%) Strand=Plus/Plus Query 999 GAATCATACAGAGAATGCGTTATTGTTGTATATGGCATGTACGCATGCCTCTAATCCAGT 1058 || |||||| || ||||| |||||||||||| | || ||||| |||||||| || Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1059 GTATGCTACGCTTAAAATACGCATCTATTTTTATGATGCAGTAACAAATTAATAAAGGTT 1118 ||| ||| | | || ||||| ||||||||||| ||| |||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1119 GAATTTTATTGCATGTTGCTCCGTAACTTGGAGTGTGTTTAGTAATACATCGTACAGAAC 1178 |||||||||| |||| | || || | | ||| | | ||||| | | | || Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1179 ATGATCAACAGCTCTGAGTACAGTGTTAATGGAAATAACGCCTATCATATTTAAATACTT 1238 || || |||||||| | | | ||||||| |||||| |||| | |||| | || Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1239 GAGCACTTGNNNNNNNNNNNNTCTTAAGAAAAGACCAGTCGGAGGCCGTAAGGTCGTCCA 1298 | || | ||||||||||| |||||||| ||||| |||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1299 GACCTTGAAGTTGAGAAAACACTTGTGAATCCCCAATGCCTTCCTGATGTTGTGGTTGAA 1358 || |||||||||||| ||| ||||||| || | ||||||| | |||||||||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1359 CCGTATCTGGAGGGTGATGATGTCG 1383 || || || | ||| |||||| Sbjct 13437 TCGAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8844721940425