Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003825.1 Length=2861 Score E Sequences producing significant alignments: (Bits) Value seq19028 205 2e-49 >seq19028 Length=31091 Score = 205 bits (226), Expect = 2e-49 Identities = 574/872 (66%), Gaps = 48/872 (6%) Strand=Plus/Plus Query 1749 GAATACAGCATTATAGAGTGTCCAATCTTTTAAAGCCTCATTCTCTTCCTTATCGAGGAA 1808 |||| | ||||||| | | ||||| |||||| ||| | ||||| |||||||| Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAA 13847 Query 1809 GTCTT-------GGAAAGAGGTGTCCCCACCAGGGTTGCAAAGGACTATTGATGGGATGC 1861 |||| |||| ||| |||||| ||||| | || |||| || || | Sbjct 13848 CTCTTTATAGCTGGAAGTAGG-------ACCAGGATTGCACAAGAAGATTGTCGGTATCC 13900 Query 1862 CACCTTTAATTTGAACTGGCTTTCCATATTTACAGTTTGACTG--CCAGTCTCTCTGGGC 1919 |||| || || | || ||| |||| ||||| | ||| ||| ||| | || ||||| Sbjct 13901 CACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACCAATTGCTTTGGGC 13958 Query 1920 CCCAATCAGCTCTTTCCAGTGCTTTAACTTTAAATAGTGCGGTGTGACGTCATCAATGAC 1979 ||| || | |||||| ||||||||| ||| ||||| ||||| |||||||| Sbjct 13959 CCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGACGTTATCAATGAT 14012 Query 1980 GTTATACAAGGCACTATTTGAATACACTCTGCTGTTAAAATCTAAGTGGCCGGATAAATA 2039 ||||||| ||||| |||||||||| | | | | || |||||||| || ||| ||| || Sbjct 14013 GTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTA 14072 Query 2040 ATTATGTGGGCCCAAGCTCCTAGCCCACATTGTCTTGCCGGTCCTAGACTCACCCTCAAT 2099 ||||||||| || || || |||||| |||||| || || ||||||||||||||||| Sbjct 14073 ATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAAT 14132 Query 2100 TATAATACTTTTATATC-TCATAGGCCGCGCAGCGGCACTAACTCCAAAATAATCATCCG 2158 | |||||| || || | | |||||||||||||| | | | || || ||| | | Sbjct 14133 GACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGC---ATCCCTAACATTTTCAGCTG 14189 Query 2159 CCCATTCTTGCATATCTTCAGGAACGTTAGTAAATGAAGATAATTGAAACGGAGGGACAA 2218 |||| ||| ||| || | || ||||| | ||| ||| ||| Sbjct 14190 CCCA-----GCA----CTCA-----ATTGTTGAAGGAAGAACAACTAAAAGGACTAACAT 14235 Query 2219 ACGGAGTTGGTGCCGGAGTAAAAATCCTATCTAAGTTAGAAACTAAATTATGATAACAAA 2278 | || || | || | || || | |||||| || | ||||| ||||||||| || Sbjct 14236 AAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTGAA 14295 Query 2279 ATAAAAAATCTTTAGGCAATTTTTCTTTTATAATTTGTAGAGCTTCCTCTTTTGAGGAAC 2338 ||| ||| | | |||| ||||||| | ||||| || ||||| || |||| | | Sbjct 14296 ATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAG 14355 Query 2339 GGTTTAGGGCCTCTGCACATTCGTCGTTAGCTGTCTGCTGGCCTCCTCTAGCAGATCTAG 2398 ||| || |||||| || | || || | ||| || |||||||||||||||| Sbjct 14356 CACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTC 14415 Query 2399 CGTCAATCTGGAATTCTCCCCATTCGATAGTGTCTCCGTCCTTGTCGACGTAGGAGTTGA 2458 | || || || || | ||||| ||| | || | ||| || ||| ||| || | Sbjct 14416 CATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAA 14475 Query 2459 CGTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGTTGACCTGGT-TGGG 2517 | || || |||||||| || | ||| || ||| ||||| || || || | | Sbjct 14476 CATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG--CTAGTATTAG 14532 Query 2518 GAT--ACCAGGTCGAAGAATCGTTGATTTTTGCAGTTGAATTTCCCTTCGAATTGTATAA 2575 ||| | | |||||| || | ||| | | | || ||||||||||| |||| Sbjct 14533 GATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAA 14592 Query 2576 GCACATGGAGATGAGGTTCCCCATTTTCGTGT 2607 | ||||| |||| |||||||| | |||| Sbjct 14593 GGGCATGGCTATGAAATTCCCCATCCTGGTGT 14624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9039849621570