Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003828.1 Length=2773 Score E Sequences producing significant alignments: (Bits) Value seq19028 419 4e-114 >seq19028 Length=31091 Score = 419 bits (464), Expect = 4e-114 Identities = 1040/1567 (66%), Gaps = 111/1567 (7%) Strand=Plus/Plus Query 972 TCATACTGAGAATGCCTTGTTATTGTATATGGCTTGTACTCATGCTTCTAACCCAGTGTA 1031 ||||||||| ||||| ||||| |||||| || |||||||| ||||| || || || Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1032 CGCTACGTTGAAAATACGTATTTATTTTTATGATGCTGTAACAAATTAATAAAAATTAAA 1091 ||| ||| || ||| | |||||||||||| |||| |||||||||||| ||| || Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1092 TTTTATTTCATGATTTTCAGTTACATCAATTGTTCTTTCAAATACATGAAACAATACATA 1151 |||||||||||||| |||| |||||| | |||| |||| ||||| || ||||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1152 ATCAACTGCTCTAACAACATTATTTAAAGAAATTACACCCAAATTATTCAAATATTTACA 1211 || || ||||||| || ||| || | | ||| ||||| || | ||| |||| Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1212 GACTTGATATTTAAAGACTCTTAAAAAATGACCAGTCGGAGACTGTAAGGTCGTCCAGAT 1271 || || ||||||| |||||||| ||| ||||||| |||| |||| ||| Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1272 GTGGAAGTTGAGAAAACATTTGTGAATCCCCAGTTCCTTCCTCAAGTTGTGGTTGAATCT 1331 | ||||||||| ||| |||||||| |||||||||||||| |||||||||||||| Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1332 GATTTGGAATGTTAGTGTGTTGTATTTGTTGTTGAATGGGTT---CTGA--TTGTGTCTG 1386 ||||| | | | | ||| | ||||| |||| ||| |||| ||||| || Sbjct 13440 AATTTGTATTTCGATTATGTCG-----GTTGTCGAATTTGTTGGTCTGAGATTGTGGTTG 13494 Query 1387 GTTATCGTGAAATATAGGGG--------ATTT------------GTTATCCCGAAGGTAT 1426 ||| |||||||||| |||| ||| | || | | Sbjct 13495 AGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACT 13554 Query 1427 AAACGCCACTCGTTGCTTGATGCGCAGTGATGTACTCCCCTGTGCGTAAATCCATGATTT 1486 | |||||| || | ||||| || ||||||||||| ||||||||||||| |||||||| Sbjct 13555 AGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCA 13614 Query 1487 ATGCAGTCTAAGTGTATGTAATAA-GAGCAGCCACAGTCCAGATCTACCCTTCTACGCCT 1545 ||| |||| | | |||| || || ||||| ||| |||| | ||| | || Sbjct 13615 GAACAG-CTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCT 13673 Query 1546 CACTTGCCTCTTCTTGGC-----GATGTG---ATG------------TTGTATTTTG--- 1582 | ||| ||||||||| ||| || ||| |||||| || Sbjct 13674 GATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCT 13733 Query 1583 --------ATTGGTAT--------CTGC--GAACAATGGCTGGTGGATGGTGACGAAGAT 1624 ||||| || |||| ||| ||||| || ||||||| ||| Sbjct 13734 ATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTC 13793 Query 1625 TGCATTCTTAGTAGCCCAGTTTTTTAATGCTTGAtttttttCTTCGTCGAGATATTCTTT 1684 |||||| | || ||| ||||||||| ||||||||| || ||||| | ||||| Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1685 AAATGATGATTGTGGG-CCTGGATTGCATAGGAAGATAGTGGGAATGCCTCCTTTAATTT 1743 | | | || || || || |||||||| | |||||| || || || || || || || | Sbjct 13854 ATA-GCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCT 13912 Query 1744 GAATGGGCTTGCCATACTTTGTGTTGCTTTGCCAATCTCTTTGGGCCCCCATAAATTCTT 1803 | ||| | || || ||| ||||| ||||| ||||||||||||||||| |||| Sbjct 13913 TTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1804 TAAAGTGTTTTAAATAATGCGGGTCGACGTCATCAATGACGTTATACCAAGCATTATTGC 1863 ||||||| |||| ||||||||| ||||||| |||||||| ||||||||| |||||||| Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTG 14032 Query 1864 TGTATACTTTTTGACTGAGGTCAAGATGGCCGCACAAATAATTATGTGGGCCTAATGAAC 1923 || | ||| | | | | || | ||| ||||| | ||||||||||| ||||| || | Sbjct 14033 AATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATC 14092 Query 1924 GGGCCCACGTTGTCTTTCCTGTCCGGCTGTCACCCTCAATCACTATACTCACCGGTC-TC 1982 |||||| |||||| ||||| | ||||||||||| || |||||| |||| | Sbjct 14093 TTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTT 14152 Query 1983 CAAGGCCGCGCAGCGGCATCCATGACGTTCTCGGAAACCCAGTGTTCAAGTTCATCAGGA 2042 | |||||||||||||||||| | || || || | ||||| |||| Sbjct 14153 AATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA----------- 14201 Query 2043 ACTTGATCGAAAGAAGAAGATAAAAAAGGAGAAACATAAGGTGCCGGAGGCACCTGGAAA 2102 ||| | ||| |||||| | ||||||| |||||||||| | ||||| | ||| Sbjct 14202 --TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAAT 14258 Query 2103 ACCTTATCTAAATTACTATTTATATTATGAAAATG---TAGAACGTAATCTCTAGGCGCT 2159 | |||||| || | |||||||||| | || ||||| | | | ||| | Sbjct 14259 ATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAA---ACTTTGCTGGCATT 14315 Query 2160 AATTCTTTAATTACATCAAGAGC--CTGCGACTTACTTCCTGCGTTAATTGCCTTTGCGT 2217 |||| |||| | | ||| || || | | | | | || | | || | ||| Sbjct 14316 TTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGA--TGTAGCACTTAACGCTTCTGCAG 14373 Query 2218 AAGCGTCGTTGGCTGTCTGTTGTCCTCCCCTAGCAGATCGTCCGTCGATCTGGAAAGTAC 2277 | | || || | ||| ||| ||||| |||||||||||||| ||||| || ||| | | Sbjct 14374 ATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGC 14433 Query 2278 CCCATTCAAGAACATCTCCGTCCTTGTCGATATAGGACTTGACGTCGGAGCTCGATTTAG 2337 |||| || ||| | ||| || |||| || ||| || || || ||||||| Sbjct 14434 CCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAG 14493 Query 2338 CTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGT-TGGGGAT--ACCAGGTCGAAGA 2394 | || | ||| || ||| ||||| || || || | |||| | | |||||| Sbjct 14494 CGGATTGGAAGTTTGGGTGG-TATGTGGTG--CTAGTATTAGGATGGATGATATCGAAGT 14550 Query 2395 ATCGTTGATTGGTACAATTGT-ATTTTCCTTCGAATTGGATGAGAATATGGAGATGAGGT 2453 || | || || |||||| || ||||||||||| || || |||| |||| | Sbjct 14551 GTCTAGGGTTTCTA-AATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAAT 14609 Query 2454 TCCCCAT 2460 ||||||| Sbjct 14610 TCCCCAT 14616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8758353950410