Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003830.1 Length=2634 Score E Sequences producing significant alignments: (Bits) Value seq19028 149 1e-32 >seq19028 Length=31091 Score = 149 bits (164), Expect = 1e-32 Identities = 242/347 (70%), Gaps = 10/347 (3%) Strand=Plus/Plus Query 1534 TTTTCCTCTTTGTTGAGGAAATCTTTATAGCTGGCACCCTCACCAGGATTGCAAAGCACG 1593 |||||||| | | ||||| ||||||||||||| | |||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1594 ATTGCTGGGATCCCTCCTTTAATTTGAACTGGCTTACCGTACTTGCAATTGGATTGCCAG 1653 |||| || ||||| || || || | || ||| | ||||| || ||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1654 TCCTTCTGGGCCCCCAGAAGTTCCTTCCAGTGCTTTAACTTTAGATAGTGCGGTGCGACG 1713 | | |||||||||| || || || ||||||||| |||| ||||| ||||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTA------GATAATGCGGATCGACG 14001 Query 1714 TCATCAATGACGTTATACTCCACTTCGTTCGAGTAGACCTTTGGGTTGAAGTCCAGATGA 1773 | |||||||| ||||||| | | || || || | || || || || | |||| Sbjct 14002 TTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGA 14061 Query 1774 CCACTTAGGTAATTATGTGGGCCTAATGCCCTAGCCCACATCGTCTTCCCTGTCCTCGAA 1833 || | ||||||||||||||| ||||| | || |||||| ||||||||||| || || Sbjct 14062 CCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGAC 14121 Query 1834 TCACCTTCCACGATGATACTAATAGGTC-TTTCCGGCCGCGCAGCGG 1879 ||||| || | || ||||| | |||| || ||||||||||||| Sbjct 14122 TCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8317005626800