Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003861.1 Length=2755 Score E Sequences producing significant alignments: (Bits) Value seq19028 237 3e-59 >seq19028 Length=31091 Score = 237 bits (262), Expect = 3e-59 Identities = 564/845 (67%), Gaps = 33/845 (4%) Strand=Plus/Plus Query 1611 GCATTCTTCAGAGCCCAAGCCTTCAATGCGATATTCTTCGCCTCGTCAAGGAATTCTTTA 1670 ||||| | || || |||| || ||| ||||| || |||| || ||||| |||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1671 TAGCTGGAATTGGGCCCAGGATTGCACAGGAAGATAGTGGGGATTCCCCCTTTAATTTGA 1730 ||||||||| | || ||||||||||||| |||||| || || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1731 ACTGGTTTCCCGTACTTGGTGTTTGACTG--CCAGTCCCTTTGGGCCCCCATGAATTCCT 1788 || || | ||||| || || ||| ||| | |||||||||||||| || || | Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTG--CTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1789 TAAAGTGCTTTAGATAATGCGGATCTACGTCATCAATTACGTTGTACCATGCATCATTGC 1848 ||||||||||||||||||||||||| |||| |||||| | ||| ||||| |||| ||| Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTG 14032 Query 1849 TGTAAACCCTAGGACTCAAGTCCAGATGTCCACACAGATAGTTGTGTGGACCCAATGACC 1908 |||| || | |||| || | ||| || || || || || ||||| || || || | Sbjct 14033 AATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATC 14092 Query 1909 TAGCCCACATCGTTTTGCCTGTACGACTATCGCCCTCGATGACTATACTATTAGGTC-TC 1967 | |||||| || || ||||| | | || ||||| ||||| ||||| || |||| | Sbjct 14093 TTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTT 14152 Query 1968 AAAGGCCTCGCAGAGGCACCCATGACATTCTCTGACACCCACTCCTCAAGTTCATCTGGA 2027 || |||| ||||| |||| || | ||||| || | |||| ||||| Sbjct 14153 AATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA----------- 14201 Query 2028 ACTTGGTCAAATGAAGAGGCTGAGAAGGGAGACACATACACCTCGGGAGGAGGTGTAAAA 2087 | || || ||||| || ||| ||||| || ||||| || | || Sbjct 14202 ---TTGTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAAT 14258 Query 2088 ATCCTATCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAATCCTTG--GGTGCTA 2145 || | |||||| || | | || ||||||| |||| ||| | || | ||| || | Sbjct 14259 ATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCATTT 14316 Query 2146 ACTCCTTAATGACTCTAAGAGCCTCTGGCTTACTGCCTGT----GTTAAGTGCTGCGGCG 2201 || |||| | ||| || ||| | | | ||| |||| ||| | || Sbjct 14317 TTTCTCTAATAATAGAAAGCGCTTCT---TCAATTGATGTAGCACTTAA-CGCTTCTGCA 14372 Query 2202 TAAGCGTCGTTGGCTGTCTGCTGTCCCCCTCTTGCAGATCTTCCATCGATCTGAAACTCA 2261 | | || || | ||| || || ||||| ||||||| ||||||||| ||||| | Sbjct 14373 GATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTG 14432 Query 2262 CCCCAGTCGATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACGTCTGAGCTGGACTTA 2321 ||||||||| || || | || || ||||||| ||| || ||||| || ||| Sbjct 14433 CCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTA 14492 Query 2322 GCGCTCTGTATGTTGGGGTGGAAACTGGTGCTACTGCTTGGGTGTACACAATCGAATTGC 2381 ||| || | ||| |||||| | |||||||| | | || || | |||||| || Sbjct 14493 GCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAGGATGGATGATATCGAAGTGT 14552 Query 2382 CGATTGTTTGT-GATCGTGAGCTTCCCTTCGAACTGAAGCAGAGCATGGAGGTGAGGTTC 2440 | | |||| | || ||| ||| |||||||| |||| || |||||| ||| ||| Sbjct 14553 CTAGGGTTTCTAAATTGTG-CCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTC 14611 Query 2441 CCCAT 2445 ||||| Sbjct 14612 CCCAT 14616 Score = 120 bits (132), Expect = 5e-24 Identities = 254/371 (68%), Gaps = 15/371 (4%) Strand=Plus/Plus Query 958 CATACTGAGAATGCATTAATGTTGTACATGGCGTGTACTCATGCCTCTAATCCTGTATAC 1017 |||||||| |||||||| |||||| || | |||||||| |||||||||||||| Sbjct 13084 CATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1018 GCTACGTTGAAGATTAGAATCTACTTCTATGATTCAGTG-AGCAA-TTAATAAATATTTA 1075 ||| ||| | | | || || ||||| |||| | ||| |||||||||||| | Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAG--AGTGTATCAAATTAATAAATATTGA 13198 Query 1076 ATTTTATTAAATTAGACT---GCTCAAC-ACGGTCAGTCCCATGGATTACATTGTACAAT 1131 |||||||| || | | | | || | || || | | || ||||||||| | ||| Sbjct 13199 ATTTTATTTCATGATATTCAAGTACATCCACTGTTTG-CTCA---ATTACATTGAATAAT 13254 Query 1132 ACATGCTCTACGGCGTTTACAACAGTATTAATACTTATAACTCCTAAGCGATCTAAGTAT 1191 |||| ||||| || | | || | | |||||||| ||||| ||||| || ||||| || Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1192 TTCAATACTTGGGTCTTAAATACCCTCAAGAAACGCCAGGTCTGAGGCTGTAAGGTCGTC 1251 |||| ||| | |||||||| || |||||| | ||| |||| |||| ||| Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1252 CAGACCTTGAAATCCATCCAGCATTGGTGTAGTCCCAACGCTCTCCTCAGGTTGTGGTTG 1311 | || |||||| | | | || ||| || || | ||||||||||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1312 AACCGTATCTG 1322 || || || || Sbjct 13435 AATCGAATTTG 13445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8704066273278