Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003866.1 Length=2583 Score E Sequences producing significant alignments: (Bits) Value seq19028 159 6e-36 >seq19028 Length=31091 Score = 159 bits (176), Expect = 6e-36 Identities = 245/342 (72%), Gaps = 13/342 (4%) Strand=Plus/Plus Query 1697 CCTGGATTGCACAGCACGATTGAGGGTATGCCACCTTTAATTTGAACTGGCTTGCCGTAC 1756 || |||||||||| | ||||| ||||| ||||| || || | || ||| | ||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1757 TTACAGTTTGATTG-CCAGTCCCTTTGGGCCCCAATAAGCTCTTTCCAGTGCTTTAGCTT 1815 || | ||| | | ||| | ||||||||||| |||| |||||| ||||||| Sbjct 13930 TTT-ACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTT------ 13982 Query 1816 TAGATAATGCGGAGCTATGTCATCAATGACGTTATACTCCGCATTATTTGAAAAGACCTT 1875 ||||||||||||| | | || |||||||| ||||||| |||||||||||| | | || Sbjct 13983 TAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTT 14042 Query 1876 TGAATTAAAGTCGAGGTGCCCACTCAAATAATTATGTGGTCCTAAAGCACGCGCCCACAT 1935 ||| || || | || || | | ||||||||||||||||||| | |||||| Sbjct 14043 ATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTC 14102 Query 1936 GGTCTTGCCGGTTCGTGAATCACCTTCAACTATGATACTAATAGGTC-TTTCCGCCCGCG 1994 ||||| || |||| || ||||| |||| | ||||| | |||| || | ||||| Sbjct 14103 TGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCG 14162 Query 1995 CAGCGGCACTCCGACCAAAATAGTCATCTGCCCATGAACTCA 2036 |||||||| ||| | || || ||| ||||||| | ||||| Sbjct 14163 CAGCGGCA-TCC--CTAACATTTTCAGCTGCCCA-GCACTCA 14200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8153864362582