Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003867.1 Length=2620 Score E Sequences producing significant alignments: (Bits) Value seq19028 167 4e-38 >seq19028 Length=31091 Score = 167 bits (184), Expect = 4e-38 Identities = 256/357 (72%), Gaps = 16/357 (4%) Strand=Plus/Plus Query 1660 TTTTCCTCTTTGTTCAGGAAATCTTTATAGCTGGAGCCCTCACCTGGATTGCAAAGCACG 1719 |||||||| | | ||||| |||||||||||||| ||| |||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1720 ATTGCTGGGATCCCACCTTTAATTTGAACTGGCTTGCCGTACTTGCAATTTGACTG--CC 1777 |||| || |||||||| || || | || ||| | ||||| || | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1778 AGTCTCTCTGGGCCCCCAGCAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGA 1837 | | || |||||||||| || ||||| |||||||||| ||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGA 13999 Query 1838 CGTCATCAATGACGTTATACTCCACTGCATTTGAATAGACTCGAGAATTGAAATCCAAAT 1897 ||| |||||||| ||||||| | ||||||||| | | | ||| ||||| |||| Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1898 GGCC-CATGAGATAATTATGTGGACCCAGTGCACGTGCCCACATTGTCTTCCCTGTTCTC 1956 | || ||| || ||||||||||| || | | | ||||||| ||||||||||||||| Sbjct 14060 GACCGCAT-AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTA 14118 Query 1957 GAGTCTCCTTCAACTATGATACTAATAGGTC-TATCTGGCCGCGCAGCGGAACCCCT 2012 || || || |||| | ||||| | |||| | |||||||||||||| | |||| Sbjct 14119 GACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8272221750348