Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003891.1 Length=2749 Score E Sequences producing significant alignments: (Bits) Value seq19028 269 5e-69 >seq19028 Length=31091 Score = 269 bits (298), Expect = 5e-69 Identities = 573/841 (68%), Gaps = 36/841 (4%) Strand=Plus/Plus Query 1651 TATTCTTGTCTTCGTCCAGAAATTCTTTATAACTGCTGTTAGGTCCTGGATTGCAGAGAA 1710 |||| || || || || || || |||||||| ||| |||| || |||||||| | | Sbjct 13826 TATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGA 13885 Query 1711 AGATAGTGGGAATGCCTCCTTTAATTTGAACTGGCTTTCCGTATTTT---GTGTTGGATT 1767 |||| || || || || || || || | || ||| ||||||||||| || |||| Sbjct 13886 AGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGA-- 13943 Query 1768 GCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTCAGATAATGCGGATCGACGT 1827 ||| | |||||||||||||| |||||||||||||| || ||||||||||||||||||| Sbjct 13944 -CCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGT 14002 Query 1828 CATCAATGACGTTGTACCACGCATCATTTGAGTACACTCGTGGGCTCAAGTCCAAATGAC 1887 |||||||| ||| ||||| |||| |||||| || | | |||| || ||||||| Sbjct 14003 TATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGAC 14062 Query 1888 CGCATAGATAATTATGCGGGCCTAAAGACCTAGCCCACATGGTTTTGCCCGTACGACTAT 1947 ||||||| |||||||| || |||||||| || |||||| || || || || | | | Sbjct 14063 CGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACT 14122 Query 1948 CACCTTCAATAACAATACTTATGGGCC--TAATAGC--GGCAGCGGCATCCACAACATTT 2003 |||| ||||| |||||||| |||| | |||| || |||||||||||| ||||||| Sbjct 14123 CACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTT 14182 Query 2004 TCTGCAGCCCAATGATGGAGTTCCTCTGGAACTGTATCAAATGAAGAACAAAGAAATGGA 2063 || || ||||| | | ||| || || | || ||||||||| ||| ||| Sbjct 14183 TCAGCTGCCCA-----GCA----CTC---AATTG--TTGAAGGAAGAACAACTAAAAGGA 14228 Query 2064 GAAACATAAACCTCCGCCGAAGGCGTAAAAATCCTATCTAAATTAGCATTTAAATTATGA 2123 ||||||| || | | ||| | || || | |||||| || | | || ||||||| Sbjct 14229 CTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGA 14288 Query 2124 AATTGTAATACAAAATCTTTG--GGAGCTTTCTCCCTTAAAATATCGAGGGCCGCAGCTT 2181 |||| |||| ||| ||||| || ||| || || | |||| || || | | Sbjct 14289 TATTGAAATAGAAA--CTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAA 14346 Query 2182 TGGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGCTGACCTCCTCTAG 2241 | || | | | | || || ||| || | || || | | || ||||||||||| Sbjct 14347 TTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAG 14406 Query 2242 CTGATCTGCCATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTTTCCACAT 2301 | |||| ||||||||||| ||| || | || || | || | |||||| | | | Sbjct 14407 CAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGT 14466 Query 2302 AGGCCTTGACATCTGAA-CTGCTCTTAGCTTTCTGAATGTTTGGATGGAAATGTGTTGAT 2360 | ||| ||||||||| || | ||||| || | |||||| ||| ||||| || Sbjct 14467 ATTTCTTAACATCTGAAGATGAT-TTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG-- 14522 Query 2361 CTGGT-TGGGGA--AACCAGGTCGAAGAATCTGTTATTTGTGCATTGGAATTTTCCTTCG 2417 || || | ||| | | |||||| ||| ||| | |||| || |||||| Sbjct 14523 CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCG 14582 Query 2418 AACTGGATGAGCACGTGGAGATGAGGTTCCCCATCTACGTGAAGCTCTCTACACACTCTA 2477 || || || || | ||| |||| ||||||||| ||| ||| ||| |||||| Sbjct 14583 AATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCTA 14642 Query 2478 A 2478 | Sbjct 14643 A 14643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8684873183370