Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003896.1 Length=2766 Score E Sequences producing significant alignments: (Bits) Value seq19028 405 9e-110 >seq19028 Length=31091 Score = 405 bits (448), Expect = 9e-110 Identities = 767/1123 (68%), Gaps = 77/1123 (7%) Strand=Plus/Plus Query 967 GAATCATACTGAGAATGCATTATTATTGTATATGGCATGTACACATGCCTCTAACCCAGT 1026 || ||||||||| |||||||| || |||||| | || ||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1027 GTATGCTACGTTGAAGATACGGATCTATTTCTATGATTCGAT-TCAGAATTAATAAAAAT 1085 ||| ||| ||| | ||| | ||||| ||||| | ||| |||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATAT 13195 Query 1086 TAAATTTTATATCATGATCTTCAATTACATCAAATGTTGAGTCTAGTACATTATACAATA 1145 | |||||||| ||||||| ||||| |||||| | |||| || | |||||| | |||| Sbjct 13196 TGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATA 13255 Query 1146 CATGATCAACTGATCTAATTACATTGTTAATGCTAATAACTCCTAAACTATCTAAATACT 1205 ||| || || | |||||| | ||||||||| |||||||| ||||| | |||||| | | Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1206 TCATGACTTGGGTCTTAAATACCCTCAAGAAACGCCAAGTCGCTGGTTGTAAGCGAGTGA 1265 |||| || | |||||||| || |||||| | |||| || |||| ||||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1266 AAACTGTGAAGTCCAGGAAGCATTTGTGTATCGCCAATGCTCTCCTCAGGTTGTGATTGA 1325 | |||||| ||||| |||||| | || | | ||||||||||||| |||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1326 ACTGTATCCGGACTTGAATGATGTCG-TGGTTGTAGTTGAACGG--GCGCTTGTGGTGCT 1382 | | || | | || || |||||| | || | | ||| | | | ||||||| Sbjct 13436 ATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGGT--- 13492 Query 1383 TTATGATCTTGAAATAGAGGGG-ATTTGGAACCCTCCAGATAT----------------A 1425 | | |||||||||||| || | | | ||| |||| | Sbjct 13493 TGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGA 13552 Query 1426 CT---CGCCATTCATCGCTTGACGAGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGGT 1482 || |||||||||||||||| ||||||||||| ||||||||||||| ||||||| Sbjct 13553 CTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGAC 13612 Query 1483 TATGGCAGTTGATATGCAGGTAGTAAGAACACCCGCACGGCAAATCAATTC-TCTTCCTC 1541 | ||| | |||| | | ||||| || || |||| || | || ||||| || Sbjct 13613 CAGAACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTC 13672 Query 1542 CGGATGGACCTCTTCTTCGCTAT-----TTTGT-------GTTGGA--CCTTG------- 1580 | | | | ||||||| | ||| | ||| |||| ||||| Sbjct 13673 TGATTTGTC-TCTTCTT-GATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATG 13730 Query 1581 -----------ATAGGTA--------CCTGA--GTATAGTGGCTCGTTGAGGGTGATGAA 1619 || || | |||| | ||| ||| | ||| |||| ||| Sbjct 13731 TCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAA 13790 Query 1620 TTCTGCATTTTTTAAAGCCCAGGCTTTTAATGCGCTGTTTTTCTCCTCATCGAGGTACTC 1679 ||||||||| | |||| ||| ||||||| | ||||| ||||| |||||| |||| Sbjct 13791 TTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTC 13850 Query 1680 TTTATAGCTGGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGTATTCCACCTTTAAT 1739 |||||||||||| | || || |||||||| | |||||| || ||||| ||||| || || Sbjct 13851 TTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTAT 13910 Query 1740 TTGAACTGGCTTGCCGTACTTGGTGTTGCTTTGCCAATCTCTCTGGGCCCCCATGAATTC 1799 | || ||| | ||||| || ||||| ||||| || ||||||||||| || || Sbjct 13911 CTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTC 13970 Query 1800 TTTGAAATGTTTCAGATAATGCGGATCAACGTCATCAATGACGTTATACCACGCATCATT 1859 ||| || || || |||||||||||||| |||| |||||||| ||||||||| |||| ||| Sbjct 13971 TTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATT 14030 Query 1860 TGAATACACTTTAGGGCTTAAATCAAGGTGCCCACATAAATAATTATGTGGACCCAATGA 1919 |||||| | |||| | ||||| | || || |||| ||||||||||| || || || Sbjct 14031 TGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGA 14090 Query 1920 ACGCGCCCAAACAGTCTTCCCTGTTCTAGACTCACCCTCTATTACTATACTTATGGGTC- 1978 | ||||| | |||||||||||||||||||||||||| || || ||||| |||||| Sbjct 14091 TCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCG 14150 Query 1979 TCAAAGGCCGCGCAGCGGCATCCTTCACATTCTCGGCGACCCA 2021 | || |||||||||||||||||| | ||||| || || |||| Sbjct 14151 TTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8735962249295