Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003897.1 Length=2759 Score E Sequences producing significant alignments: (Bits) Value seq19028 212 1e-51 >seq19028 Length=31091 Score = 212 bits (234), Expect = 1e-51 Identities = 276/378 (73%), Gaps = 3/378 (1%) Strand=Plus/Plus Query 1617 GCATTCTTTATAGCCCAGTTTTTTAGTTTAGAATTCTTTTCTTCATCCAAGAATTCTTTA 1676 ||||| | | || ||| ||||||| |||| ||| ||||| || || | ||| |||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1677 TAGCTGGAGTTGGGTCCTGGATTGCAGAGGAAGATTGTGGGAATTCCGCCTTTAATTTGA 1736 |||||||| | || || |||||||| | ||||||||| || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1737 ACTGGCTTATTGTACTTTCTATTTGATTG-CCAGTCCCTTTGGGCCCCCATGAATTCCTT 1795 || ||| | ||| ||| ||| | | ||| | |||||||||||||| || || || Sbjct 13915 ACAGGCCTTCCGTA-TTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1796 AAAGTGCTTTAGGTAGTTGGGGTCTACGTCATCAATTACGTTATACCACGCATCATTACT 1855 |||||||||||| || | || || |||| |||||| | ||||||||| |||| ||| Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGA 14033 Query 1856 GTAGACCTTTGGGCTAAGGTCTAGATGACCACACAAATAATTATGTGGTCCCAGTGATCT 1915 || | || | | |||| |||||| || | |||||||||||||| | ||||| Sbjct 14034 ATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCT 14093 Query 1916 GGCCCACATTGTTTTCCCCGTCCTACTGTCACCCTCAATCACTATACT-TACGGGCCTCA 1974 |||||| ||| ||||| || ||| ||||||||||| || ||||| | || | | | Sbjct 14094 TGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTA 14153 Query 1975 AAGGCCGCGCAGCGGCAT 1992 | |||||||||||||||| Sbjct 14154 ATGGCCGCGCAGCGGCAT 14171 Score = 154 bits (170), Expect = 3e-34 Identities = 253/362 (70%), Gaps = 7/362 (2%) Strand=Plus/Plus Query 963 GAATCATACTGAAAATGCATTGATGTTGTATATGGCGTGTACTCACGCCTCTAACCCTGT 1022 || ||||||||||||||||||| |||||||| | ||||| || ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1023 GTATGCTACTTTGAAGATACGGATCTATTTTTATGATTCAGTATCGAATTAATAAATATT 1082 ||| |||| ||| | ||| | ||||||||||| ||||| |||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1083 GAATTTTATTGAACATG--TTTGGTCTACATATACAACGTGGTGTAATACATTCCATAAT 1140 |||||||||| |||| || ||||| || || | | |||||| ||||| Sbjct 13197 GAATTTTATT--TCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAAT 13254 Query 1141 ACATGATCAACGGCTCTAATTACATTGTTAATACTGATAACTCCTAAATTATTTAAGTAC 1200 |||| || || |||||||| | |||||||||||| ||||| ||||| | ||| | Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1201 TTAAGCACTTGGGTCTTAAATACCCTTAAGAAACGACCAGTCGGAGGCTGTAAGGTCATC 1260 || | || | |||||||| ||||||||| |||||||| |||| || Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1261 CAGATTCGGTAGACTAGGAAACATTTGTGTATCCCCAACACTTTCCTCAGGTTGTGATTG 1320 | ||| | || |||||| |||||| | || | |||||||||||||| ||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1321 AA 1322 || Sbjct 13435 AA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8716861666550