Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_003898.1 Length=2739 Score E Sequences producing significant alignments: (Bits) Value seq19028 325 7e-86 >seq19028 Length=31091 Score = 325 bits (360), Expect = 7e-86 Identities = 752/1123 (67%), Gaps = 85/1123 (8%) Strand=Plus/Plus Query 957 CATACAGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCAGTAATCCTGTGTAT 1016 ||||| || ||||| ||||||| |||| | |||||||| ||||||||| ||| Sbjct 13084 CATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1017 GCTACTTTGAAAATCAGAATTTATTTCTATGATTCTGTTCAAAATTAATAAATTTTAAAT 1076 |||| ||| || | | |||||| ||||| ||| |||||||||||| || ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1077 GTTATTATATGTGAAAACTGAGCATCGACTGTGCCCTCTATTACATTGTATAGTACATTT 1136 ||||| ||| | | |||| ||||| ||| ||||||||| ||| |||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT- 13259 Query 1137 GTC-ATTGCTCTAATTACATTGTTTAAACTAATAACTCCTAAATTGTCTAAATACTTCAT 1195 ||| | |||||||| | |||||| | ||||||||| ||||| ||||||| | ||||| Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1196 -ACATTGATATTTAAATACCCTCAAGAAATGCGAGGTCTGAGGTTGTAAACGAGTCCAAA 1254 ||| || |||||||||| || |||||| | ||| |||| |||||||||||| | Sbjct 13320 TACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1255 TCTGGCAAATTAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTAGTTGAATT 1314 ||| | | | || ||| | ||| | || | ||||||||||||| ||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1315 GAATTTGTATTGTCATGACGTCGTGGTTCTGTAGAAAT----GGTCTCTGGTTGTG-TTG 1369 ||||||||||| || | |||| ||| || ||| | ||||| | ||||| ||| Sbjct 13439 GAATTTGTATTTCGATTATGTCG--GTT--GTCGAATTTGTTGGTCTGAGATTGTGGTTG 13494 Query 1370 TGTTATTTTGAAATAGAGGGG--------ATT-------------GTTGACTGTCCAGGT 1408 | || |||||||| || ||| |||||| || | | Sbjct 13495 AGG-ATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGAC-GTAAACGA 13552 Query 1409 ATACACGCCATTCTCTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGAGAATCCATGTG 1468 || ||||||||| ||||| ||||||||| |||||||||||| ||||||| Sbjct 13553 CTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGAC 13612 Query 1469 ATGCGCAGTTAAT-TCCAAGATAATAAGAGCACCCACAAGGAAGATCAACCCTCCGCCTG 1527 | ||| |||| | || || || || |||||||| || || | | | || Sbjct 13613 CAGAACAGCTAATATTTTTGAATATT-GAACATCCACAAGGCAGGTCTAGTCGTCTTCTT 13671 Query 1528 CGAATTGGTCTCTTCTTCGCTAT-----TTTGT-------GTTGGA--CCTTG------- 1566 | ||| |||||||||| | ||| | ||| |||| ||||| Sbjct 13672 CTGATTTGTCTCTTCTT-GATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATG 13730 Query 1567 -----------ATTGGCA--------CGTGA--GTAGAGTGGCTCGGTGAGGGTGATGAA 1605 ||||| | | || | | | ||| | |||| |||| ||| Sbjct 13731 TCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAA 13790 Query 1606 TTCCGCATTCTTTAAAGCCCAGTCTTTGAGTGCGAAATTCTTTTCTTCGTCTAAGTACTC 1665 ||| ||||| | |||| ||| | ||| | | | ||| ||||| || || | | |||| Sbjct 13791 TTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTC 13850 Query 1666 TTTATATGATGATGTTGGCCCTGGATTGCAAAGGAAGATTGTTGGGATACCACCTTTAAT 1725 |||||| || || || || |||||||| | ||||||||| || || ||||| || || Sbjct 13851 TTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTAT 13910 Query 1726 TTGAATTGGTTTCCCGTATTTGGTGTCGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTC 1785 | | || | |||||||| | ||| ||| | |||||||||||||| || || Sbjct 13911 CTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTC 13970 Query 1786 TTTAAAGTGCTTTAGATAGTGGGGATCGACGTCATCAATGACGTTGTACCATGCCTCATT 1845 |||||||||||||||||| || |||||||||| |||||||| ||| ||||| || | ||| Sbjct 13971 TTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATT 14030 Query 1846 GTTGTAGACTCTTGGGCTTAGGTCAAGATGACCACACAAGTAATTGTGTGGGCCTAGAGA 1905 || | | | | | || | |||||| || | |||||| ||||| |||| ||| Sbjct 14031 TGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGA 14090 Query 1906 CCTGGCCCAAAGTGTCTTCCCTGTACGACTCTCTCCCTCTACCACAATACTCATGGGTC- 1964 || ||||| |||||||||||| | | ||| ||||| | ||||||||| |||||| Sbjct 14091 TCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCG 14150 Query 1965 TCCATGGCCGCGCAGCGGAATCCCTCACGTTCTCGGCAACCCA 2007 | ||||||||||||||| |||||| || || || || |||| Sbjct 14151 TTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8652884700190