Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004005.1 Length=2781 Score E Sequences producing significant alignments: (Bits) Value seq19028 347 2e-92 >seq19028 Length=31091 Score = 347 bits (384), Expect = 2e-92 Identities = 1028/1570 (65%), Gaps = 105/1570 (7%) Strand=Plus/Plus Query 984 CATACTGAAAACGCCTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCAGTGTAT 1043 ||||||||||| || ||||| |||||| | || ||||| |||||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1044 GTAACTATGAAAATACGCATCTATTTCTATGATTCAATATCAAATTAATAAAATTTATAT 1103 ||||||| || ||||| ||||| ||||| ||||||||||||||| || || Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1104 TTTATATCATGAGTTTCTGTTACATTTATTGTGTTTTCAAGTACATCATACAATACATGA 1163 ||||| |||||| ||| ||||| | ||| | |||| ||||| | ||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1164 TCAACTGCTCTGATTACATTGTTAATGGAAATTACACCAAGACTATCTAAATACTTAAGA 1223 || || ||||| || | ||||||||| ||| ||||| | | |||||| | || | Sbjct 13261 TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATT 13320 Query 1224 ACTTCATATCTAAATACTCTTAAGAAATGACCAGTCTGAGGCTGTAATGTCGTCCAAATT 1283 || | || ||||||||||||||||| ||| |||| |||| |||| || Sbjct 13321 ACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGATC 13380 Query 1284 CGGAAGTTGAGAAAACATTTGTGAATCCCCATTACCTTCCTGATGTTGTGGTTGAATCTT 1343 ||||||||| ||| |||||||| || | ||||||| | |||||||||||||| Sbjct 13381 TTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGA 13440 Query 1344 ATCTGAATGGAAATGATGTCGTGGTTCATTAGAAATGGCCGCTGGCTGTG-TTCTGTT-- 1400 || || || || |||||| ||| | ||| | | | | ||| | || || | Sbjct 13441 ATTTGTATTTCGATTATGTCG--GTTG--TCGAATTTGTTGGT--CTGAGATTGTGGTTG 13494 Query 1401 ---ATCTTGAAATAGAGGGGATTGTT--TATCTCCCAAATA------------AAA---- 1439 ||||||||||| || | | | ||| ||||||||| ||| Sbjct 13495 AGGATCTTGAAATATAGAA-ACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGAC 13553 Query 1440 ---ACGCCATTCTCTGCCTGAGGAGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGATT 1496 ||||||||| || || ||||||||||| ||||||||||||| |||||||| Sbjct 13554 TAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACC 13613 Query 1497 GTTGCAGTTGAGGTGGAGGTAGTATGAGCAGCCACAGTCTAGGTCTACACGCTTACGCCT 1556 ||| | | | | | ||| || ||||| ||||||| || | | || Sbjct 13614 AGAACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCT 13673 Query 1557 TATTGGTTTCTTCTTG-------GCTATCT---TGTGTTGGA---CCTTG---------- 1593 ||| || |||||||| | ||| | || | | | ||||| Sbjct 13674 GATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCT 13733 Query 1594 --------ATTG--ATA------CTTGC--GAACAGTGGCTCGTAGAGGGTGACGAAGGT 1635 |||| ||| | ||| ||| | ||| | || |||| ||| Sbjct 13734 ATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTC 13793 Query 1636 TGCATTCTTGAGCGCCCAATTTTTCAAGGATATAtttttttCTTCGTCTAGATATTCCCT 1695 |||||| | | | ||||||||| || ||||||||||| || || || | || | Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1696 ATATGAGGAGGTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCC-CCCTTTAATTT 1754 ||| ||| ||||| || |||||||| | |||||| || || || || ||||||| || Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1755 GAATGGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCCT 1814 | || ||||| ||| ||| ||||| ||| | || ||||||||||| || || | Sbjct 13914 TACAGGCCTTCC-GTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1815 TGAAGTGCTTTAAATAATGCGGGTCTACGTCATCAATGACGTTGTACCACGCATCATTAC 1874 | |||||||||| ||||||||| || |||| |||||||| ||| ||||| |||| ||| Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTG 14032 Query 1875 TGTACACCTTTGGGCTTAGGTCTAGATGTCCACATAAATAATTATGTGGGCCTAGAGACC 1934 || | || | | |||| ||| || |||| ||||||||||| |||| ||| | Sbjct 14033 AATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATC 14092 Query 1935 TGGCCCACATTGTTTTGCCTGTTCTGCTATCACCCTCAATGACAATACTATTAGGTC-TC 1993 | |||||| ||| || |||||||| |||||||||||||||||||| || |||| | Sbjct 14093 TTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTT 14152 Query 1994 CATGGCCGCGCAGCGGAAGACACGACGTTCTCAGCGACCCACTCTTCAAGTTCATCTGGA 2053 ||||||||||||||| | | || || ||||| |||| |||| Sbjct 14153 AATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA----------- 14201 Query 2054 ACTTGATTAAAAGAAGAAGAAAGAAATGGAGAAACATAAACTTCTAAAGGAGGACTAAAA 2113 ||| || || |||||| || ||| ||| ||||||| ||| ||| || | || Sbjct 14202 --TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAAT 14258 Query 2114 ATCCTATCTAAATTTGAACTTAAATTATGAAATTGTAAAATATAGTCCTTTGGGGCCTTC 2173 || | |||||| |||| | || ||||||| |||| ||||| | | || ||| || Sbjct 14259 ATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCATTT 14316 Query 2174 TCT-TTTAAT-ATATTGAGGGCCTC-GGATTTATTGCCTGAATTGAGTGCTTCGGCATAT 2230 | | | |||| ||| || || || | || || | | | | ||||| ||| || Sbjct 14317 TTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG-TAGCACTTAACGCTTCTGCAGAT 14375 Query 2231 GCGTCGTTGGCAGATTGCTGACCTCCTCTAGCTGATCTGCCATCGATTTGGAAAACTCCA 2290 | || || | | || |||||||||||| |||| ||||||||||| ||| || Sbjct 14376 ACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCC 14435 Query 2291 AAATCAATGAAGTCTCCGTCTTTCTCCACGTAGGTCTTGACATCTGTTGAGCTCTTAGCT 2350 | || || | || | ||||||| | | ||| |||| ||||||| || ||||| Sbjct 14436 CAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCG 14495 Query 2351 GCCTGAATGTTCGGATGGAAATGTGCTGATCTGTTTGGGGAT--ACCAGGTCGAAGAACC 2408 | || | ||| || ||| ||||| || | || | |||| | | |||||| | Sbjct 14496 GATTGGAAGTTTGGGTGG-TATGTGGTGCT-AGTATTAGGATGGATGATATCGAAGTGTC 14553 Query 2409 GTTGGTTCTTACATTGGTATTTGCCTTCGAATTGGATAAGCACATGGAGATGTGGTTCCC 2468 |||| || |||| |||||||||||||| ||||| ||||| ||| ||||| Sbjct 14554 TAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCC 14613 Query 2469 CATTCTCGTG 2478 ||| || ||| Sbjct 14614 CATCCTGGTG 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8783944465970