Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004091.1 Length=2749 Score E Sequences producing significant alignments: (Bits) Value seq19028 325 7e-86 >seq19028 Length=31091 Score = 325 bits (360), Expect = 7e-86 Identities = 743/1107 (67%), Gaps = 92/1107 (8%) Strand=Plus/Plus Query 952 GAATCATACTGAGAATGCGTTATTATTGTATATGGCATGTACTCATGCCAGTAATCCAGT 1011 || ||||||||| ||||| ||| |||||||| | |||||||| |||||| || Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1012 GTATGCTACTTTGAAGATCAAA-ATCTATTTCTATGATTCTGT-TCAGAATTAATAAAAA 1069 ||| |||| ||| || || | ||||| ||||| ||| ||| |||||||||| | Sbjct 13137 ATATTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATA 13194 Query 1070 TTGAATTTTATTATACTTGATAATTC---TTCATCAATTGTCCCCTCTAATACATTGTAT 1126 |||||||||||| | ||||| ||| | |||| | ||| ||| | ||||||| || Sbjct 13195 TTGAATTTTATTTCA--TGATA-TTCAAGTACATCCACTGTTTGCTCAATTACATTGAAT 13251 Query 1127 AATACATGAGAAAATGCCCTAATTACATTGTTTATACTAATCACTCCCAAATTGTCTAAA 1186 ||||||| | || ||||| | |||||| |||||||| || || || ||||||| Sbjct 13252 AATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAA 13311 Query 1187 TATTTAAT-ACATTGATACTTAAATACTTTTAAAAAACACCAAGTCTGAGGACGTAAATG 1245 |||| || ||| || | ||||||||| |||| ||| | ||| ||||||||||| | Sbjct 13312 AATTTCATTACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACG 13370 Query 1246 AGTCCAAATTCTGCAGATTAGAAAACATTGGTGTATCCCCAACGCTTTCCTCAGGTTGTA 1305 ||||| || || || | || ||| || ||| | || | ||||||||||||| Sbjct 13371 AGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTG 13430 Query 1306 GTTGAATTGGACTTGGAGTGTTATTACGTCGTGGTTCG---TTGAGAACGGCCTCTGGTC 1362 ||||||| | | ||| | | |||| |||| ||| ||| || || | | Sbjct 13431 GTTGAATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTT---GGTCTGAGATT 13487 Query 1363 GTGCTGGGTGATTTTGAAATATAGGGG--------ATTTC-------------TGACCGT 1401 ||| | | ||| ||||||||||| ||||| |||| || Sbjct 13488 GTGGTTGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGAC-GT 13546 Query 1402 CCAGATATACACGCCATTCTCTGCTTGAGCTGCAGTGATGGGTTCCCCGGTGCGAAAATC 1461 | || ||||||||| ||||| ||||||||| |||||| ||||| | ||| Sbjct 13547 AAACGACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATC 13606 Query 1462 CATGATTGTGGCAGCCTATAGCTATGAAATAAGAGCATCCACAAGGGAGGTCAACTCGTC 1521 ||||| |||| ||| | |||| || ||||||||||| ||||| | ||||| Sbjct 13607 CATGACCAGAACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTC 13666 Query 1522 GTCTCCTCGTTGTTCGCTTG--GCTAT-----TTTGT-------GTTGCA--CCTTG--- 1562 ||| || || || ||| | ||| | ||| ||||| ||||| Sbjct 13667 TTCTTCTGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTAT 13726 Query 1563 ---------------ATTGGAA--------CCTGA--GTAGAGTGGCCGTTGGATGGTGA 1597 ||||| | |||| | | | ||| || ||||||| Sbjct 13727 AATGTCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGT 13786 Query 1598 CGAAGATCGCATTATGTATAGCCCAATTTTTTAATGCGGAATTCTTTTCTTCGTCTAAGA 1657 ||| |||||||| | || ||||||||||||| ||| ||||| || || | || Sbjct 13787 AGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGA 13846 Query 1658 ACTCTTTATAGCTGGAATTGGGTCCTGGATTGCATAGGAAGATTGTTGGGATACCACCTT 1717 ||||||||||||||||| | || || |||||||| | ||||||||| || || ||||| | Sbjct 13847 ACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCT 13906 Query 1718 TAATTTGAACTGGCTTCCCATACTTTGTATTGGATTGCCAGTCCCTTTGGGCCCCCATGA 1777 | || | || ||| | || || ||| ||| ||| | |||||||||||||| | Sbjct 13907 TTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAA 13966 Query 1778 ATTCCTTAAAGTGCTTTAGATAGTGGGGGTCGACGTCATCAATGACGTTATACCAAGCAT 1837 | || ||||||||||||||||| || || ||||||| |||||||| ||||||||| |||| Sbjct 13967 ACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCAT 14026 Query 1838 CATTGCTGTATACCTTT--GGGCTGAGATCAAGATGTCCACACAGATAATTGTGTGGTCC 1895 ||| || ||| ||| | | ||| | ||| || || || ||||| |||||||| Sbjct 14027 TATT--TGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCC 14084 Query 1896 TAACGACCTAGCCCACATTGTTTTACCAGTACGACTATCACCTTCTATCACAATACTAAT 1955 ||| || || |||||| ||| || || || | | ||||| || || |||||||| | Sbjct 14085 TAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTT 14144 Query 1956 CGGTC-TCAAAGGCCGCGCAGCGGCAT 1981 |||| | || |||||||||||||||| Sbjct 14145 GGGTCGTTAATGGCCGCGCAGCGGCAT 14171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8684873183370