Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004097.1 Length=2615 Score E Sequences producing significant alignments: (Bits) Value seq19028 230 4e-57 >seq19028 Length=31091 Score = 230 bits (254), Expect = 4e-57 Identities = 473/688 (69%), Gaps = 33/688 (5%) Strand=Plus/Plus Query 1516 TTTTTCTCTTCGCTGAGATACTCTTTATATGATGAATGGGGGCCAGGATTGCATAGGAAG 1575 ||||| || || ||| |||||||||| ||| || ||||||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1576 ATAGTGGGAATTCCTCCTTTAATTTGAATTGGCTTTCCGTATTTGCAGTTTGATTG-CCA 1634 || || || || || || || || | | ||| |||||||||| | ||| | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCA 13946 Query 1635 ATCACGTTGGGCCCCCATGAACTCTTTAAAGTGTTTCAGATAATGCGGATCAACGTCATC 1694 || | |||||||||||| |||||||||||||| || |||||||||||||| |||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1695 TATGACGTTATACCATGCATGATTGGAGTAAATTCTCGGGTTGAGATCGATATGACCACA 1754 |||| ||||||||| |||| ||| || |||||| | || | ||| | |||||| || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1755 TAGGTAATTGTGAGGACCCAGACTTCGGGCCCATATTGTCTTGCCTGTTCTTGATGGTCC 1814 ||||||||| || || || | | || ||||| |||||| |||||||| || || Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1815 TTCAACGATGATTGATATAGGTC-TCAACGGCCGCGCAGCGGAATCGGAAATATTTTCGT 1873 |||| || || | |||| | || ||||||||||||| ||| || |||||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAG 14186 Query 1874 TAACCCAGTCCGACATAATTAAAGGGACATTGTTGAAAG-TGGATAACTGAAATGGAGGA 1932 ||||| | || ||||||||| | | | |||| ||| ||| | Sbjct 14187 CTGCCCAG-CACTCA-------------ATTGTTGAAGGAAGAACAACT-AAAAGGACTA 14231 Query 1933 ACCCACGGTTCCGTTGGTGGTGTGAATATTTTCTCCAGATTAGAACGGATGTTGTGATAT 1992 || | ||||| | || || |||||||| || | || | | || || |||||| Sbjct 14232 ACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 1993 TGGACAACGAAATCTTT--TGGCTGTTCTTCTTT--TAATACCGTCATTGCAGCTTCAAT 2048 | || | |||| |||| |||| || |||| | ||||| | | || ||||||| Sbjct 14292 T-GAAATAGAAA-CTTTGCTGGCATTTTTTCTCTAATAATA--GAAAGCGCTTCTTCAAT 14347 Query 2049 ACAATCTGCATTTAACGCTTTTGCATATGAGTCGTTTGCGGATTGTTGTCCTCCTCTTGC 2108 | ||| ||||||||| |||| || || |||| | ||| |||||||| || Sbjct 14348 TGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGC 14407 Query 2109 AGATCTACCGTCGATCTGGAATTGGCCCCATTCAATGGTG-ACTC-CA-TCCTTGTCGAT 2165 ||||| || ||||| || || | |||||| || |||| | || || || || |||| Sbjct 14408 AGATCGTCCATCGATTTGAAAATTGCCCCAGTC---GGTGTAATCACAGTCTTTCGCGAT 14464 Query 2166 GTATGCTTTAACATCTGAACTTGATTTA 2193 |||| |||||||||||| ||||||| Sbjct 14465 GTATTTCTTAACATCTGAAGATGATTTA 14492 Score = 143 bits (158), Expect = 4e-31 Identities = 403/610 (66%), Gaps = 39/610 (6%) Strand=Plus/Plus Query 839 CATACTGAGAACGCATTATTGTTGTATATGGCATGTACACATGCTTCTAATCCTGTATAT 898 |||||||| || ||||| ||||||||| | || ||||| ||||||||||||||| Sbjct 13084 CATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 899 GCTACTTTGAAAATTCGGATATATTTTTACGATTCGATAATGAATTAATAAAATTTGAAT 958 |||| ||| || || | |||||||| || || |||||||||| |||||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 959 TTTATTTCATGATTTTCAAGCACGTC----ATTTACATAACTTC--TGTCCGTTGCATAT 1012 ||||||||||||| |||||| || || ||| | || | | || | ||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1013 GAGACAGCTTTGATTACATTGTTAATTGAAATAACTCCTAAATTATCTAAATAAGACAGT 1072 |||||| | || | ||||||||| |||||| ||||| |||||| | || | Sbjct 13261 TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATT 13320 Query 1073 ACAAGGTATTTAAAT-CTATTTA-AATAAATCTGCCCAGAAGCTGTCGTCAATGTCGTCC 1130 ||| | |||||||| || || | || | | || | | || | ||| || | |||| Sbjct 13321 ACACGAAATTTAAATACTCTTAAGAAAACGTATGTC--GGAG--GACGTAAACG-AGTCC 13375 Query 1131 AGACTTGGAAATTGAAGAAGGCTTTGTGGAGAGCCAACGCTTTCCTCAGGTTGTGGTTGG 1190 || | ||| |||| ||| |||||||| ||| || | |||||||||||||||||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1191 CTCGGATTTGAATGTCGAACACCGTGCTGTTCGTGTACATTGG-CT--TCTCCACGTTGA 1247 ||| ||||| || |||| | | | ||| | |||| || | ||||| Sbjct 13436 ATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGGTTGA 13495 Query 1248 TTATTTTGAAATAGAG-GGGATTTATAATCTCCCAAATA------------AAA------ 1288 || |||||||| || | || || ||||||||| ||| Sbjct 13496 GGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTA 13555 Query 1289 -ACGCCATTCGTTGCTTGAACTGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGATTTG 1347 ||||||||| | ||||| ||||||||| ||||||||||||| |||||||| | Sbjct 13556 GACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAG 13615 Query 1348 CGCAACTAATATGAATGTATATTGAACAGCCACACTCTAGATCTAACCTTCTACGTCGAG 1407 || ||||||| || |||||||||| ||||| || |||| | ||| | || Sbjct 13616 AACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCTGA 13675 Query 1408 TCTGTCTCTT 1417 | |||||||| Sbjct 13676 TTTGTCTCTT 13685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8256227508758