Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004101.1 Length=2613 Score E Sequences producing significant alignments: (Bits) Value seq19028 154 2e-34 >seq19028 Length=31091 Score = 154 bits (170), Expect = 2e-34 Identities = 267/385 (69%), Gaps = 11/385 (3%) Strand=Plus/Plus Query 1484 GAATTGAGCATTTTTTAATGTCCACGCTCTTAATTCTGCATTTTCCTCTTTGTTGAGGAA 1543 ||||| ||||| | || | ||| | |||||| ||||| || | | |||||| Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAA 13847 Query 1544 AGCTATATAGCTGCTACCTTCCCCTGGATTGCACAGCACGATTGATGGTATCCCGCCTTT 1603 || |||||||| | || |||||||||| | ||||| |||||||| || || Sbjct 13848 CTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTT 13907 Query 1604 AATTTGAACTGGCTTTCCGTATTTACAGTTGGACTG--CCAGTCTTTTTGGGCCCCAATA 1661 || | || ||| |||||||||| ||| ||| ||| | |||||||||| ||| Sbjct 13908 TATCTTTACAGGCCTTCCGTATTTTACCTTG--CTGGACCAATTGCTTTGGGCCCCCATA 13965 Query 1662 AGCTCTTTCCAGTGTTTCATCTTTAGATATTGGGGCGTGATATCATCAATGACGTTATAC 1721 | |||||| |||| ||||||||| || || || | |||||||| ||||||| Sbjct 13966 AACTCTTTAAAGTG------CTTTAGATAATGCGGATCGACGTTATCAATGATGTTATAC 14019 Query 1722 TCCACATAGTTTGAATAGACCTTTGCATTGAAATCAAGATGACCGCTCAAATAATTATGT 1781 ||| |||||||| | || ||| ||||| | |||||||| | ||||||||| Sbjct 14020 CAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGT 14079 Query 1782 GGGCCTAGTGCACGTGCCCACATTGTCTTGCCGCATCGCGAATCACCCTCAATGACAATA 1841 || |||| | | ||||||| |||||| || || || |||||||||||||||||| Sbjct 14080 GGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATA 14139 Query 1842 CTAATCGGTC-TATCTGGCCGCGCA 1865 || | |||| | |||||||||| Sbjct 14140 CTCTTGGGTCGTTAATGGCCGCGCA 14164 Score = 82.4 bits (90), Expect = 1e-12 Identities = 108/149 (72%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 852 GAATCATACTGAGAACGCCCTGCTATTGTATATGGCATGTACACATGCCTCTAACCCTGT 911 || ||||||||| || || || |||||||| | || ||||| ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 912 GTACGCGACATTGAAAATTCGAATCTATTTTTATGATTCGATAACAAATTAATAAAGTTT 971 || || ||| || || | ||||||||||| || |||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 972 GCATTTTATTTCATGATTCTCAAGTACAT 1000 | ||||||||||||||| |||||||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACAT 13225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8249829812122