Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004147.1 Length=2746 Score E Sequences producing significant alignments: (Bits) Value seq19028 511 8e-142 >seq19028 Length=31091 Score = 511 bits (566), Expect = 8e-142 Identities = 1153/1723 (67%), Gaps = 100/1723 (6%) Strand=Plus/Plus Query 969 GAATCATTCTGAGAATGCGTTAATGTTGTATATGGCATGTACTCATGCCTCTAACCCAGT 1028 || |||| |||| ||||| || ||||||||| | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1029 GTATGCTACTTTGAAGATACGGATCTATTTCTATGATTCCGTAACAAATTAATAAATATT 1088 ||| |||| ||| | ||| | ||||| ||||| ||| |||||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1089 AAATTTTATTGAATATGATTGTTCTACATATACAATGTGTTGTAATACATCCCATAAAAC 1148 ||||||||| || ||| ||||| || | || | | ||||| |||| || Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1149 ATGATCAACTGATCTGATTACATTATTAATACTGTTAACTCCTAAATTATCTAAATATTT 1208 || || || | ||| || | ||| |||||||| |||| ||||| |||||| |||| Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1209 TAAAACTTGAGTCTTAAAGACCCCTAAGAAACGACCAGTCTGAGGCTGTGAAGTCATCCA 1268 | || || ||||| || | ||||||| ||| |||| || || ||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1269 GATTCGGTAGACTAGAAAACATTTGTGCATCCCCAACGCTTTCCTCAGGTTGTAGTTGAA 1328 ||| | || || ||| |||||| | || | ||||||||||||| |||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1329 CTGTATTTGGACTTTGATTATGTCTTCTTTC-ATTGTGAATGGACGG---TTGTGGTGTT 1384 | ||||| | || ||||||||| | || | | || ||| | | ||||||| | Sbjct 13437 TCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGT-TGGTCTGAGATTGTGGT--T 13493 Query 1385 CTGTTATCTTGAAATACAGGGGATTTTGA-ATCTCCCAGATA-------------AAC-- 1428 | ||||||||||| || | | || ||||| ||| ||| Sbjct 13494 GAGG-ATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGA 13552 Query 1429 ----ACGCCATTCTCTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATAAT 1484 ||||||||| ||||| ||||||||| ||||||||||||| |||||| | Sbjct 13553 CTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGAC 13612 Query 1485 TGTGACAGGCTAGTGCTATGAAATAT-GAACATCCACAAGGGAGATCAACACGACGACGT 1543 |||| ||| | | | ||||| |||||||||||||| || || | || | | | Sbjct 13613 CAGAACAG-CTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTT 13671 Query 1544 CTGTTC---CTCTTCTTGGCTAGCCTG---------------TGCTGCACTT-------- 1577 ||| | ||||||||| || || | |||| ||| Sbjct 13672 CTGATTTGTCTCTTCTTGA-TATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATG 13730 Query 1578 ----TG-----ATTGGAA--------CCTGA--GTAGAGTGGGCCTTCGAGGGTGACGAA 1618 || ||||| | |||| | | | ||| | || |||| ||| Sbjct 13731 TCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAA 13790 Query 1619 GATCGCATTCTTTAAAGCCCAATTTTTCAGTGCGTTATTTTTCTCTTCGTCCAAGAACTC 1678 ||||| | |||| ||||||||| | | ||||||| || || || | |||||| Sbjct 13791 TTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTC 13850 Query 1679 TTTATAGCTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGTATTCCTCCTTTAAT 1738 ||||||||| || | || || |||||||| | |||||| || ||||| || || || || Sbjct 13851 TTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTAT 13910 Query 1739 TTGAACTGGCTTTCCGTACTTTGTATTTGATTG-CCAGTCCCTTTGGGCCCCCATGAATT 1797 | || ||| ||||||| ||| || | | | ||| | |||||||||||||| || | Sbjct 13911 CTTTACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACT 13969 Query 1798 CCTTAAAGTGCTTTAAATAATGCGGATCGACGTCATCAATGACGTTGTACCAGGCATCAT 1857 | ||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||| || Sbjct 13970 CTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTAT 14029 Query 1858 TATTGTAGACCTTAGGACTAAGGTCTAAGTGACCACACAGATAATTATGTGGACCCAAAG 1917 | || | ||| | | | ||||| ||||| || || ||||||||||| || |||| Sbjct 14030 TTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAG 14089 Query 1918 ACCTAGCCCACATCGTCTTTCCTGTTCTACTATCACCCTCTATGACAATACTCATGGGTC 1977 | || |||||| ||||| ||||||||| |||||||| |||||||||||| |||||| Sbjct 14090 ATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTC 14149 Query 1978 -TCAAAGTCCGCGCAGCGGCACCCATTACATTCTCAACAGCCCATTCTTCAAGTTCTTCA 2036 | || | ||||||||||||| || | ||||| ||| | ||||| |||| Sbjct 14150 GTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA-------- 14201 Query 2037 GGAACTTGATTAAAAGAAGAAGATAAAAAAGGAGAAACATAAACCTCTACAGGAGGTGTA 2096 ||| || || |||||| | ||||||| ||||||| || ||| || | Sbjct 14202 -----TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATG 14255 Query 2097 AAAATCCTATCTAAATTACATTTTAAATTATGATATTGAAAAATAAAATCTTTAGGGAGT 2156 || || | |||||| || || ||||||||||||||| | ||| | | || | | Sbjct 14256 AATATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATT 14315 Query 2157 TTTTCCCTATTTATTGCTAAAGCTGCGTCAGCTGAACCTGCATTTAGGGCCTCTGCTGCT 2216 ||||| ||| | || | | ||| | ||| ||| ||| ||| || ||||| | | Sbjct 14316 TTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGAT 14375 Query 2217 GCATCATTAGCTGTCTGTTGACCTCCTCGACCATATCTTCCATCGATCTGAAACTGACCC 2276 ||||||| | ||| ||| |||||||| | || ||| ||||||||| ||||| | ||| Sbjct 14376 ACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCC 14435 Query 2277 CAGTCGATGTAATCACTGTCCTCCTCGATGTAGGACTTGACATCAGAGCTGGACTTAGCT 2336 |||||| ||||||||| ||| | | ||||||| ||| ||||| || || ||||| Sbjct 14436 CAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCG 14495 Query 2337 CCCTGGAAGTTTGGGTTGAATTGGGTGGAGTTATTAGGGTGAGTGACATCGAAATGTCTG 2396 ||||||||||||| | || |||| ||||||| || ||| |||||| ||||| Sbjct 14496 GATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAGGATGGATGATATCGAAGTGTCTA 14555 Query 2397 GTGTTTCTGAACTTGGATTTACCTTTGAACTGGATGAGGGCATGGATATGCAGAGACCCA 2456 | |||||| || | | || |||| ||| || || ||||||||| |||| | |||| Sbjct 14556 GGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCA 14615 Query 2457 TCTTGGTGTTTTTCTTGTGCCACTCTGATAAATAATTTATCAGATGGGCAATTTA-TTGA 2515 || |||||||||||||| ||||| ||| | ||||| || || ||| | || Sbjct 14616 TCCTGGTGTTTTTCTTGACAGACTCT--AAAACAGTTTATTTGAAGGACAAGAAACCTGT 14673 Query 2516 CTGAAGAATCTCGAGCATTTGCTCTTTGGGTATTGGGCATTTTGGATAAGTGAGGAAGAT 2575 | ||| ||| | ||||| ||||| || | || ||||||||| | || || || || Sbjct 14674 TTCAAG-TGCTCTAAGATTTGATCTTTAGGAAGAGGACATTTTGGAAATGTAAGAAATAT 14732 Query 2576 ATTTTTGGCATTAACACAAAAAGAGTTAAGACGAGGCATATTG 2618 ||||| | ||| || || || | ||| | ||||| ||| Sbjct 14733 GTTTTTAGAATTTACCTGGAATGAATGAAGCCTTGGCATTTTG 14775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8675276638416