Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004580.1 Length=2630 Score E Sequences producing significant alignments: (Bits) Value seq19028 131 3e-27 >seq19028 Length=31091 Score = 131 bits (144), Expect = 3e-27 Identities = 234/337 (69%), Gaps = 11/337 (3%) Strand=Plus/Plus Query 1523 TCCAGGAAATCTTTATAGCTGGATCCCTCGCCTGGATTGCAAAGCACGATTGAAGGGATC 1582 || ||||| |||||||||||||| || |||||||| | | ||||| || ||| Sbjct 13840 TCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATC 13899 Query 1583 CCTCCTTTAATTTGAACTGGTTTCCCGTACTTGCAATTTGACTG--CCAGTCTTTTTGGG 1640 || || || || | || || | ||||| || | ||| ||| ||| | |||||| Sbjct 13900 CCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACCAATTGCTTTGGG 13957 Query 1641 CCCCAAGAAGCTCTTTCCAATGCTTTAGCTTTAGGTATTGCGGTGCTACGTCATCAATGA 1700 |||| | || |||||| | |||||||| | | ||||| | |||| |||||||| Sbjct 13958 CCCCCATAAACTCTTTAAAGTGCTTTAGAT------AATGCGGATCGACGTTATCAATGA 14011 Query 1701 CGTTATAGGCAACATTATTCGAGTACACTCGATTATTGAAGTCCAGGTGTCCACTGAGGT 1760 |||||| ||||||| || || | | |||||| || || | || || | |||| Sbjct 14012 TGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGT 14071 Query 1761 AATTATGTGGGCCTAAAGCACGAGCCCACATCGTCTTGCCCGTTCTAGAATCACCTTCCA 1820 |||||||||| ||||||| | |||||| ||||| || |||||||| ||||| || | Sbjct 14072 AATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAA 14131 Query 1821 CTATGAGACTAACTGGTC-TTACAGGCCGCGCAGCGG 1856 | | ||| |||| ||| ||||||||||||| Sbjct 14132 TGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8304210233528