Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004582.1 Length=2744 Score E Sequences producing significant alignments: (Bits) Value seq19028 475 6e-131 >seq19028 Length=31091 Score = 475 bits (526), Expect = 6e-131 Identities = 685/966 (71%), Gaps = 23/966 (2%) Strand=Plus/Plus Query 1633 TTCTTTTCCTCGTCCAGATATTCTTTATAAGATGAGTTTGGCCCAGGATTGCAGAGGAAG 1692 || |||||||| || || | |||||||| || | || ||||||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1693 ATTGTGGGTATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTTGATTG-CCA 1751 ||||| ||||| ||||| || || | || ||| | ||||| ||| || | | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT-GCTGGACCA 13946 Query 1752 GTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGCTTGAGGAAGTGCGGATCGACATCATC 1811 | |||||||||||||| ||||||||||||||||| || | ||||||||||| | ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1812 AATGACGTTATACCACGCATCATTGCTGTAAACTTTGGGGCTTAAATCTAAATGACCGCA 1871 ||||| ||||||||| |||| ||| |||| ||| | ||||||||||||||||| Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1872 TAAGTAATTATGAGGCCCTAATGACCTAGCCCACATCGTTTTACCCGTACGACTGTCTCC 1931 || ||||||||| || ||||| || || |||||| || || || || | | || || Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1932 CTCAATCACTATACT-TTGAGGCCTCAGAGGCCGCGCAGCGGCATCCATGACATTCTCGG 1990 |||||| || ||||| ||| | | | | |||||||||||||||||| | ||||| || | Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAG 14186 Query 1991 AGACCCACTCTTCAAGTTCTTCAGGAACTTGATTAAAAGAAGAAGATAAAAAAGGAGAAA 2050 |||| |||| ||| || || |||||| | ||||||| || Sbjct 14187 CTGCCCAGCACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTAA 14232 Query 2051 CATAAACCTCCAACGGAGGAGTGAAAATCCTATCTANNNNNNNNNNNNNNNNNTGATATT 2110 ||||| || || || |||| || | ||||| ||||||| Sbjct 14233 CATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATT 14292 Query 2111 GAAAAATAAATTTTTCTGGGAGTTTTTCCCTTATTATAGCCATAGCTGCTTCTTTAGAAC 2170 |||| | ||| ||| |||| | |||||| || || |||| | ||| |||| | || Sbjct 14293 GAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG 14352 Query 2171 CTGCATTTAGGGCTTCTGCAGCAGCATCATTAGCTGTCTGTTGACCTCCTCTTGCAGATC 2230 ||| ||| |||||||||| ||||||| | ||| ||| ||||||||| ||||||| Sbjct 14353 TAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATC 14412 Query 2231 TTCCATCGATCTGAAATGTGCCCCAGTCGATGTAATCTCCGTCCTTCTCGATGTAGGACT 2290 ||||||||| ||||| ||||||||||| ||||||| | ||| ||| ||||||| || Sbjct 14413 GTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCT 14472 Query 2291 TAACATCAGAGCTGGACTTAGCTCCCTGGAAGTTTGGATGGAATTGGGTGGAGGTATGAG 2350 ||||||| || || ||||| ||||||||||| ||| || |||| |||| || Sbjct 14473 TAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAG 14532 Query 2351 GGTGAGTGACATCGAAATGTCTGGGGTTTCTGAACTTGGCTTTACCTTTGAATTGGATGA 2410 | || ||| |||||| ||||| |||||||| || | || || |||| |||||| || | Sbjct 14533 GATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAA 14592 Query 2411 GTGCATGGATATGCAGAGACCCATCTTGGTGTTTTTCTTGTGCAACCCTAATGAATAATT 2470 | |||||| |||| | |||||| |||||||||||||| || |||| || | || Sbjct 14593 GGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCTAA--AACAGTT 14650 Query 2471 TGTCTGAAGGGCATGAAA--TGTTAGATAATATATCTAACATCTGTTCTTTTGGAATTGG 2528 | | |||||| || |||| |||| || ||||| || || ||||| |||| || Sbjct 14651 TATTTGAAGGACAAGAAACCTGTT--TCAAGTGCTCTAAGATTTGATCTTTAGGAAGAGG 14708 Query 2529 GCATTTTGGGAAAGTAAGAAAAATATTTTTTGCATTTATGCAAAAAGAATTATTTCTGGG 2588 |||||||| || |||||||| || ||||| | ||||| || |||| | || || Sbjct 14709 ACATTTTGGAAATGTAAGAAATATGTTTTTAGAATTTACCTGGAATGAATGAAGCCTTGG 14768 Query 2589 CATTTT 2594 |||||| Sbjct 14769 CATTTT 14774 Score = 91.5 bits (100), Expect = 3e-15 Identities = 286/441 (65%), Gaps = 9/441 (2%) Strand=Plus/Plus Query 940 GAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCAGT 999 || ||| || || ||||||||| || ||||| || || ||||| ||| || || Sbjct 13080 GACTCATACTGAAAATGCATTGTTG---TATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1000 TTATGCTACGCTTAAGATTAGAATATATTTTTATGACTCTGTAACGAACTAATATTAATA 1059 ||| ||| | | | | | ||||||||||| |||| | || ||||| |||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATA--AATA 13194 Query 1060 AAGTTTGAATTTTATATCTGAATATTGGTCTACATACATTGTTTGATTAATTACATTGTA 1119 ||||||||||| || ||||| ||||| || |||||| | |||||||||| | Sbjct 13195 ----TTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAA 13250 Query 1120 CAATACATGTTCAACGGCTTTAATAACTAAATTAAGTGAGATTACACCTAGATTGTTGAG 1179 ||||||| || || ||| |||||| |||| || ||||||| || | Sbjct 13251 TAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAA 13310 Query 1180 ATACTTGAGTACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCGGAGGGTATAAGGT 1239 | | || | ||| | ||| ||||| |||||||||| |||||||| ||| Sbjct 13311 AAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACG 13370 Query 1240 CGTCCAGATTCGGAAGGTTAGAAAACACTTGTGCACTCCCAGAGCTTTCCGAAGGTTGTA 1299 |||| ||| |||| | || ||| ||||| | ||| | |||| ||||||| Sbjct 13371 AGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTG 13430 Query 1300 GTTGAATTGGATCCTCATTGTTATGATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTG 1359 ||||||| | || ||| || ||||| | ||| | ||| | | | ||| Sbjct 13431 GTTGAATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTG 13490 Query 1360 GCTGAGGATTTTGAAATAAAG 1380 | ||||||| |||||||| || Sbjct 13491 GTTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8668878941780