Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004583.1 Length=2748 Score E Sequences producing significant alignments: (Bits) Value seq19028 235 1e-58 >seq19028 Length=31091 Score = 235 bits (260), Expect = 1e-58 Identities = 285/381 (75%), Gaps = 9/381 (2%) Strand=Plus/Plus Query 1604 TGCATTCTTTAAAGCCCAATTTTTGAGTGCAGAATTCTTCTCTTCATCCAAAAACTCTTT 1663 |||||| | |||| ||||||||| | | | ||| || || || || | |||||||| Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1664 ATAGCTTGAATTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTG 1723 |||||| ||| | || || |||||||| | |||||| || || || || || || || | Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1724 AACTGGCTTCCCGTATTTTGTATTTGATTG-CCAGTCCTTTTGGGCCCCCATGAACTCCT 1782 || ||| | ||||||||| || | | | ||| | ||||||||||||| ||||| | Sbjct 13914 TACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1783 TAAAGTGCTTTAGGTAATGCGGGTCGACGTCATCAATGACGTTAAACCAGGCGTCATTAC 1842 ||||||||||||| |||||||| ||||||| |||||||| |||| ||||||| | ||| Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATT-- 14030 Query 1843 TGTATACCCTT--GGGCTCAGATCTAGATGTCCACACAGATAATTATGTGGACCTAATGA 1900 || ||| || ||| ||||| ||| || || || ||||||||||| ||||| || Sbjct 14031 TGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGA 14090 Query 1901 TCTGGCCCACATCGTCTTCCCCGTCCTACTGTCACCCTCAATCACTACACTTATTGGTC- 1959 ||| |||||| |||||||| || ||| ||||||||||| || | ||| | |||| Sbjct 14091 TCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCG 14150 Query 1960 -TATTGGCCCGCGCAGCGGCA 1979 || ||| ||||||||||||| Sbjct 14151 TTAATGG-CCGCGCAGCGGCA 14170 Score = 96.9 bits (106), Expect = 6e-17 Identities = 240/361 (66%), Gaps = 5/361 (1%) Strand=Plus/Plus Query 951 GAATCATTCTGAGAATGCTTTAATGTTGTATATGGCGTGTACTCACGCCTCTAACCCAGT 1010 || |||| |||| ||||| || ||||||||| | ||||| || ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1011 GTATGCTACCTTGAAGATACGGATCTACTTCTATGATTCCGTGACAAATTAATAAATATT 1070 ||| ||| ||| | ||| | || || ||||| || |||||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1071 GAATTTTA-TTGAAGATGATTGGTCTACAAATACAACATGTTGTAATACATTCCATAATA 1129 |||||||| || | ||| ||| |||| || || | | |||||| |||||| Sbjct 13197 GAATTTTATTTCATGAT-ATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATA 13255 Query 1130 CATGATCAACTGCTCTAACTACATTATTAATACTGACAATTCCTAAGTTATTTAAATATT 1189 ||| || || ||||||| | ||| |||||||| | || ||||| | |||| ||| Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1190 TAAGCACTTGAGTCCTAAAGACCCTTAAGAAACGACCAGTCGGAGGCTGTGAGGTCATCC 1249 | | || || |||| || ||||||||| |||||||| || | ||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1250 AGATTCGGAAAGCTATGAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGA 1309 ||| ||| | |||| |||||| | || | |||||||||||||| |||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1310 A 1310 | Sbjct 13436 A 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8681674335052