Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004608.1 Length=2745 Score E Sequences producing significant alignments: (Bits) Value seq19028 185 2e-43 >seq19028 Length=31091 Score = 185 bits (204), Expect = 2e-43 Identities = 298/422 (71%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 1708 GAACAGTGGTTCTTTGAGGGTGTAGAATTCCGCATTCTTTGAAGCCCACTGTTTAAGCGC 1767 ||| | ||||| | ||| |||||||||||| ||||| | ||| ||| | ||| | Sbjct 13764 GAATAATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTT 13823 Query 1768 AGCATTGTTCTCTTCATCCAAGTACTCTTTATAGGAGGACTTGGGACCAGGGTTACACAG 1827 | ||| || || || || | | ||||||||||| ||| | |||||||| || |||| Sbjct 13824 AATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAA 13883 Query 1828 AAAGATGGTGGGGATACCA-CCTTTAATTTTAGTGGGCTTCCCGTACTTGACGTTAGACT 1886 ||||| || || || ||| |||||| |||| || ||| ||||| || || || || Sbjct 13884 GAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTT-CCGTATTTTACCTT--GCT 13940 Query 1887 G--CCAGTCTCTTTGCGCGCCCATGAATTCTTTGAAATGTTTCAAATAATGTGGATCAAC 1944 | ||| | ||||| || ||||| || ||||| || || || | |||||| ||||| || Sbjct 13941 GGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGAC 14000 Query 1945 GTCATCGATGACGTTGTACCATGCCTCGTTAGAGTATGTTTTGTCGTTTAGATCCAAATG 2004 || ||| |||| ||| ||||| || | || || || |||| | || | ||| ||||| Sbjct 14001 GTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATG 14060 Query 2005 GCCGCAAAGATAATTATGAGGACCTATGGCACGTGCCCACATGGTTTTACCCGTGCGACT 2064 ||||| || |||||||| || |||| | | ||||||| || || || || | | Sbjct 14061 ACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGA 14120 Query 2065 ATCTCCTTCAATAACTATACTAATAGGTC-TATCTGGCCGC---GCGGCATCTCTCACAT 2120 || || ||||| || ||||| | |||| | ||||||| |||||||| || |||| Sbjct 14121 CTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACAT 14180 Query 2121 TT 2122 || Sbjct 14181 TT 14182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8672077790098