Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004613.1 Length=2748 Score E Sequences producing significant alignments: (Bits) Value seq19028 389 7e-105 >seq19028 Length=31091 Score = 389 bits (430), Expect = 7e-105 Identities = 960/1441 (67%), Gaps = 103/1441 (7%) Strand=Plus/Plus Query 958 TCATACTGAGAATGCCCTTTTATTGTATATGGCATGTACTCATGCCAGTAACCCAGTGTA 1017 ||||||||| ||||| || |||||||| | |||||||| ||| || || || Sbjct 13083 TCATACTGAAAATGCA---TTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1018 TGCAACATTGAAGATCA-GAATCTATTTCTATGATTCTGT-TCAGAATTAATAAATATTG 1075 | || ||| || || | | ||||| ||||| ||| ||| ||||||||||||||| Sbjct 13140 TTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTG 13197 Query 1076 AATTTTATTATATATGAAAATTGAG--CATCAATTGTGCCTTCGAATACATTGTACAATA 1133 ||||||||| || || | | || |||| | ||| || | ||||||| | |||| Sbjct 13198 AATTTTATTTCAT--GATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATA 13255 Query 1134 CATGATTGATTGCCCTAATTACATTGTTAATGCTAATAACTCCTAATCTATCTAAATACT 1193 ||| | | || ||||| | ||||||||| |||||||| ||||||| |||||| | | Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1194 TCAT-ACATTGGTATTTAAATACTCTTAAGAAATGCCCAGTCCGAGGATGTAAACGAGTC 1252 |||| ||| | |||||||||||||||||||| ||| ||||| ||||||||||| Sbjct 13316 TCATTACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1253 CAGATTTGGCAGATTGGAAAACATTGGTGTATCCCCAACGCTTTCCTCAGGTTGTGGTTG 1312 | ||| | | || | | ||| || ||| | || | |||||||||||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1313 AACTGTATTTGGACTGTTATTATGTCGTGTTCCCGGAAGAAT-GGTCTCTCGATGTGCTT 1371 || | ||||| | | ||||||||| ||| || | | ||||| |||| || Sbjct 13435 AATCGAATTTGTATTTCGATTATGTCG-GTTGTCGAATTTGTTGGTCTGAGATTGTGGTT 13493 Query 1372 GGTTATCTTGAAATAGAGGGG--------ATTTGGGACC------GTCCAGATATACG-- 1415 | ||||||||||| || |||| | || | || ||| Sbjct 13494 GAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGAC 13553 Query 1416 ----CGCCACTCTCTGCTTGAGTTGCAGTGATGGGTTCCCCGGTGCGTGAATCCATGGTT 1471 ||||| || ||||| ||||||||| |||||| |||||| ||||||| Sbjct 13554 TAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACC 13613 Query 1472 GTGACAGTTGATGCTAATGAAGTATGAGCATCCACAGGGAAGATCAACTCTACGTCTGCG 1531 |||| | || | |||| ||| |||||||| || || || | || | ||| | Sbjct 13614 AGAACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCT 13673 Query 1532 AATTGGCCTCTTCTTG-------GCTATTC---TG----TGCTTGACTTTGAT------- 1570 ||| | ||||||||| | ||| || ||||| ||| || Sbjct 13674 GATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCT 13733 Query 1571 ------------GGGTA------CCTGA--GTACAGTGGCTCCGTGAGGGTGATGAATTC 1610 || || |||| | | | ||| | |||| |||| |||||| Sbjct 13734 ATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTC 13793 Query 1611 TGCATTCTTTACTGCCCAGTCTTTTAATGCTGAATTCTTTTCCTCGTCCAAGTACTCTTT 1670 |||||| | | | ||| | ||||||| ||| |||||||| || | | ||||||| Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1671 ATACGATGATGTTGGGCCTGGATTGCAGAGGAAGATTGTTGGGATCCCACCTTTAATTTG 1730 ||| || || || || |||||||| | ||||||||| || |||||||| || || | Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1731 CATGGGCTTCCCGTACTTTGTGTTGCTTTGCCAATCTCTTTGGGCCCCCATGAATTCTTT 1790 | ||| | ||||| ||| ||||| ||||| |||||||||||||| || ||||| Sbjct 13914 TACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1791 AAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACGTTGTACCATGCATCATTACT 1850 ||||||||||||||| || || || |||| |||||||| ||| ||||| |||| ||| Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGA 14033 Query 1851 GTACACCTTTGGACTCAAGTCAAGGTGCCCACACAAATAATTATGTGGGCCTAAAGACCT 1910 || | || | |||| || | || || || | ||||||||||| |||||||| || Sbjct 14034 ATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCT 14093 Query 1911 GGCCCACATTGTCTTTCCTGTTCTGCTCTCTCCCTCGATGACTATACTTTTGGG-CCTCC 1969 |||||| |||||| |||||||| ||| ||||| ||||| ||||| ||||| | | Sbjct 14094 TGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTA 14153 Query 1970 AAGGCCGCGCAGCGGCATCCCTTACATTCTCGGACACCCACTCTTCAAGTTCTTCTGGAA 2029 | |||||||||||||||||||| ||||| || | |||| |||| Sbjct 14154 ATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA------------ 14201 Query 2030 CTTGATcaaaagaagaagaaagaaaaggacaaacaaaaacctctaaagga-ggtgca--a 2086 ||| | || |||||| || |||||||| |||| || || |||| || ||| | Sbjct 14202 -TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTC---AGGAGGGGGCATGA 14256 Query 2087 aaaTCCTATCTAAATTAGAATTTAAATTATGAAATTGTAAAACATAATCTTTGGGGGC-- 2144 | || | |||||| || | | || ||||||| |||| ||| | || ||||| ||| Sbjct 14257 ATATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCAT 14314 Query 2145 TAATTCTTTAATTACATTAAGAGCCTC-TGACTTACTTCCGCTGTTAAGTGCTTTGGCGT 2203 | |||| |||| | | ||| || || | | || | || |||| |||| || Sbjct 14315 TTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAA-CGCTTCTGCAG 14373 Query 2204 AAGCGTCATTGGCTGTCTGTTGTCCTCCCCTTGCAGATCTTCCATCGATCTGAAACTCGC 2263 | | ||||| | ||| ||| ||||| || ||||||| ||||||||| ||||| | || Sbjct 14374 ATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGC 14433 Query 2264 CCCAGTCGAGGGTGTCTCCGTCCTTCTCCAGATAGGACTTAACGTCTGAGCTTGATTTAG 2323 |||||||| | || | ||| ||| | | || |||||| ||||| |||||||| Sbjct 14434 CCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAG 14493 Query 2324 C 2324 | Sbjct 14494 C 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8681674335052