Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004618.1 Length=2787 Score E Sequences producing significant alignments: (Bits) Value seq19028 266 6e-68 >seq19028 Length=31091 Score = 266 bits (294), Expect = 6e-68 Identities = 553/818 (68%), Gaps = 23/818 (3%) Strand=Plus/Plus Query 1686 ATATTCTTATCTTCGTCCAAGTATTCTTTATATGAAGACGTCGGCCCTGGATTGCACAGG 1745 ||||| || || || || | | | |||||||| || || || || |||||||||| | Sbjct 13825 ATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAG 13884 Query 1746 AAGATTGTCGGAATGCCGCCTTTAATTTGAATCGGCTTCCCGTACTTCGTGTTGCTTTGC 1805 ||||||||||| || || || || || | | ||| | ||||| || ||||| | Sbjct 13885 AAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGAC 13944 Query 1806 CAGTCACGCTGGGCCCCCATGAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTCA 1865 || | | ||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct 13945 CAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTA 14004 Query 1866 TCAATGACGTTGTACCAAGCCGAATTGCTGTACACTTTTGGACTGAGGTCGAGATGTCCA 1925 ||||||| ||| ||||| || ||| || | ||| | | | || | ||| || Sbjct 14005 TCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCG 14064 Query 1926 CACAAATAATTGTGTGGTCCCAATGAACGGGCCCACATTGTCTTGCCCGTCCGACTATCA 1985 || | ||||| |||||||| || || | |||||| |||||| || || | | ||| Sbjct 14065 CATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCA 14124 Query 1986 CCCTCGACTATTATACTACTCGG-CCTCCACGGCCGCGCAGCGGCATCCATCACGTTCGC 2044 ||||| | | ||||| | || | | | |||||||||||||||||| | || || | Sbjct 14125 CCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184 Query 2045 CGATGCCCATCGTTGAAGTTCATCAGGAACCTGAGTGAAGGAGGAAGCACAGAAGGGAGA 2104 | |||||| | | || | ||||||| ||| || || ||| Sbjct 14185 AGCTGCCCAGCACTCAA--------------TTGTTGAAGGAAGAACAACTAAAAGGACT 14230 Query 2105 AACATAAACCTCCGGAGGAGCTTGGAAGATCTTATCCAAATTAGCCTTGATATTATGATA 2164 ||||||| || ||||| | ||| || ||| || || | ||||||||||| Sbjct 14231 AACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATA 14290 Query 2165 TTGAAATATATAATCTTTG--GGGAGTTTCTCCTTAATAATAGCCAACGCAGCTTCAGCG 2222 ||||| ||| || ||||| || | ||| || ||||||||| | ||| ||||| Sbjct 14291 TTGAA--ATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATT 14348 Query 2223 GAACCTGCGTTTAACGCCTCGGCGGCTGCGTCATTAGCCTTATGGCAGCCGCCTCTAGCA 2282 || || ||||||| || || | | | ||||| | |||| | || ||||||||| Sbjct 14349 GATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCA 14408 Query 2283 CTACGTCCGTCGACCTGGAACTCTCCCCACTCGATGCTATCACCGTCCTTCTCGATGTAG 2342 ||||| |||| || || | ||||| ||| || ||||| ||| ||| ||||||| Sbjct 14409 GATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTAT 14468 Query 2343 GACTTGACGTCGGAACACGACTTAGCTCCCTGAACGTTTGGATGGAAATGTGTTGATCG- 2401 ||| || || ||| | || ||||| || | |||||| ||| ||||| || | | Sbjct 14469 TTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTGCTAGT 14527 Query 2402 AGTTGGGGAGACCAGATCGAAGAATCGCTGATTTTGGCACTTGT-ATTTGCCCTCGAACT 2460 | | || || | ||||||| || | ||| | |||| ||||| ||||| | Sbjct 14528 ATTAGGATGGATGATATCGAAGTGTC-TAGGGTTTCTAAATTGTGCCTTGCCTTCGAATT 14586 Query 2461 GAATGAGGGCATGCAGATGAGGTTGCCCATCCTCGTGT 2498 |||| |||||||| |||| || |||||||| |||| Sbjct 14587 GAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGT 14624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8803137352640