Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004625.1 Length=2802 Score E Sequences producing significant alignments: (Bits) Value seq19028 259 9e-66 >seq19028 Length=31091 Score = 259 bits (286), Expect = 9e-66 Identities = 579/861 (67%), Gaps = 39/861 (5%) Strand=Plus/Plus Query 1675 CCAATTCTTGAGATTGGAATTCTTGTCCTCGTCTAGGTATTCTTTATAGGACGAATTGGG 1734 |||||| || | || ||| || ||||| || ||| | ||||||||| ||| | || Sbjct 13809 CCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGG 13868 Query 1735 GCCCGGATTGCATAAGAAGATGGTGGGAATCCCACCTTTAATTTGAATGGGCTTTCCGTA 1794 || |||||||| |||||||| || || |||||||| || || | | ||| ||||||| Sbjct 13869 ACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTA 13928 Query 1795 TTTTGTGTTTGATTG-CCAATCTCGTTGGGCCCCCATGAATTCTTTGAAATGCTTTAGAT 1853 |||| || | | | ||||| | |||||||||||| || ||||| || |||||||||| Sbjct 13929 TTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT 13987 Query 1854 AATGCGGGTCTACGTCGTCAATGACGTTGTACCATGCGTCGTTTGAATATATCTTGGGAG 1913 ||||||| || |||| ||||||| ||| ||||| || | |||||||| || || | Sbjct 13988 AATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTAT 14047 Query 1914 ACAGATCCAGGTGTCCACATAGATAGTTATGTGGGCCCAGAGATCGGGCCCACATCGTCT 1973 || ||| | || || ||||| || |||||||| || | ||||| |||||| |||| Sbjct 14048 TCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCT 14107 Query 1974 TCCCGGTTCGGCTATCACCTTCGAGAACAATACTGATCGGTC-TCCATGGCCGCGCAGCG 2032 |||| |||| ||||| || | |||||||| | |||| | |||||||||||||| Sbjct 14108 TCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCG 14167 Query 2033 GGACGGCATATATTTTCGGATACCCATACTTCTATTTCCTCTGGGACTTGCGTAAATGAG 2092 | | | | |||||| | | |||| || ||| ||| || || Sbjct 14168 GCATCCCTAACATTTTCAGCTGCCCAGCACTCAATT----------GTTG----AAGGAA 14213 Query 2093 GATGATAAGAACGGACTAACGTAAGTTTGTGGCGGAGCCTGGAAGATTCGATCCGCGTTA 2152 || | || |||||||| |||| || || || | | ||| |||||||| || Sbjct 14214 GAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTT 14273 Query 2153 GCAGATATGTTATGGAACTGTaaaaaaaaGGACTT---TGGATCCTTTTCTTTGATAATT 2209 | | ||| ||||| | || || | || |||| ||| |||||| | ||||| Sbjct 14274 GGAACTATATTATGATATTGAAATAGAA---ACTTTGCTGGCATTTTTTCTCTAATAATA 14330 Query 2210 TGAAGAGCTTCTGATTTAGAAGAAGCATTCAACGCTTCTGCATATACCTGA---GCTAAA 2266 ||| |||||| | || | |||| | |||||||||||| |||| | | | | | Sbjct 14331 GAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTA 14390 Query 2267 TGCTGGCCCTCCCCCCTGGCACTTCTGGCATCGACTTGGAAAATTCCATCGTCAAGAAAT 2326 || || ||| || || ||| || |||||| ||| ||| | || ||| | Sbjct 14391 TG-TGAACCT--CCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAA 14447 Query 2327 TCCCCTCCCTTTTCAATGTAAGCCTTGACATCGGACGATGATTTAGCTCCCTGAATGTTC 2386 || | | || | ||||| ||| ||||| || ||||||||||| || | ||| Sbjct 14448 TCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTT 14507 Query 2387 GGATGGAAATGTGTTG-----ATCGGGATGGGGAAATGAGATCGAAGAATCTGGGGTTGG 2441 || ||| ||||| || || |||||| |||| ||||||| ||| ||||| Sbjct 14508 GGGTGG-TATGTGGTGCTAGTATTAGGATGG----ATGATATCGAAGTGTCTAGGGTTTC 14562 Query 2442 TACATTGGAACTTGCCTTCGAATTGGATGAGAACATGGAGATGAGGCACCCCATCCTGAT 2501 || |||| ||||||||||||||| || || ||||| |||| |||||||||| | Sbjct 14563 TAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGT 14622 Query 2502 GTAGTTCTCTGCAAACCCTAA 2522 || |||| || || |||| Sbjct 14623 GTTTTTCTTGACAGACTCTAA 14643 Score = 147 bits (162), Expect = 4e-32 Identities = 301/440 (68%), Gaps = 13/440 (3%) Strand=Plus/Plus Query 1004 GAATCATACCGAGAATGCGTTGTTATTGTATATGGCATGTACACATGCCTCAAATCCTGT 1063 || |||||| || ||||| ||||| |||||| | || ||||| || |||||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1064 GTACGCTACGCTTAAAATACGCATCTATTTCTATGATGCAGTGACAAATTAATAAATATT 1123 || ||| | | || ||||| ||||| ||||| || |||||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1124 AAATTTGATTGCATGATCTTGGGATACAGATAGGGTTCCCACAAAAACTACATTCAATA- 1182 ||||| ||| |||||| || |||| | ||| | ||| |||||| |||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAAT---TACATTGAATAA 13253 Query 1183 --CATGATGCACTGCATCTATTACAGTTGA-AATCGAAATAACACCTAAATTAGTG-AGA 1238 ||| | || || |||| || ||| ||| |||||||||||| | || | | Sbjct 13254 TACATTGTCTACAGC-TCTAATAATATTGTTAATACTAATAACACCTAA-TCGGTCTAAA 13311 Query 1239 TATTTCATGACTTGTGTCCTAAAGGTTCTGAAGAAACGCCAAGTCTGAGGATGTAAACGA 1298 ||||||| || | |||| ||| |||||| | ||| ||||| |||||||| Sbjct 13312 AATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGA 13371 Query 1299 GTCCAGATCCGGAAGTTGAGAAAACACTTGTGCATCCCCAGTGCTTGCCTCAGGTTGTAG 1358 |||| |||| ||||||||| ||| ||||| | |||| | | ||||||||||| | Sbjct 13372 GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGG 13431 Query 1359 TTGAACCGAATCTGGACATCTATTATGTCGTGAGTCATGTTGAACGGCATGCTGTCGTGG 1418 ||||| ||||| || | || ||||||||| ||| || || || | |||| Sbjct 13432 TTGAATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGG 13491 Query 1419 TTGAGGATTGTGAAATATAG 1438 |||||||| |||||||||| Sbjct 13492 TTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8851119569315