Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004627.1 Length=2734 Score E Sequences producing significant alignments: (Bits) Value seq19028 462 4e-127 >seq19028 Length=31091 Score = 462 bits (512), Expect = 4e-127 Identities = 755/1079 (70%), Gaps = 30/1079 (3%) Strand=Plus/Plus Query 1590 GGTTGT-TGAGGGTGACGAATTCCGCATTCTTTATAGCCCACTCTTTTAATGCTGAATTC 1648 |||||| ||| |||| |||||| ||||| | | || ||| | ||||||| ||| Sbjct 13771 GGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTT 13830 Query 1649 TTTTCTTCGTCCAAGTACTCTTTGTATGATGATGTTGGTCCTGGATTGCAAAGGAAGATA 1708 ||||| || || | | ||||||| || || || || || |||||||| | |||||| Sbjct 13831 TTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATT 13890 Query 1709 GTTGGGATTCCACCTTTAATTTGAATTGGTTTCCCGTACTTGGTGTTGCTTTGCCAGTCC 1768 || || || ||||| || || | | || | ||||| || ||||| ||| | Sbjct 13891 GTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTG 13950 Query 1769 CTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATG 1828 |||||||||||||| || |||||||||||||||||||| || || || |||| ||||||| Sbjct 13951 CTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATG 14010 Query 1829 ACGTTATACCAAGCATCATTACTGTACACCTTTGGACTCAGATCTAGATGACCGCACAGA 1888 | ||||||||| |||| ||| || | || | ||| ||||| ||||||||| || Sbjct 14011 ATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGG 14070 Query 1889 TAATTATGTGGTCCCAGTGATCTGGCCCACATTGTTTTACCAGTACGACTCTCTCCCTCT 1948 |||||||||||||| | ||||| |||||| ||| || || || | | ||| ||||| Sbjct 14071 TAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCA 14130 Query 1949 ATGACAATACTTTTGGGTC-TCCAAGGCCGCGCAGCGGCACCACTCACATTTTCAGAAAC 2007 ||||||||||| ||||||| | | ||||||||||||||| | || |||||||||| | Sbjct 14131 ATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGC 14190 Query 2008 CCACTCCTCAAGTTCTTCTGGAACTTGATCAAATGAAGAAGATAAAAAAGGACAAACAAA 2067 ||| ||||| ||| | || |||||| | |||||||| |||| | Sbjct 14191 CCAGCACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATA 14236 Query 2068 TACCTCTAAAGGA-GGTGCA--AAAATCCTATCTAAATTAGTATTTAAATTATGAAATTG 2124 || |||| || ||| || || | |||||| || | | || ||||||| |||| Sbjct 14237 AGGTTC---AGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTG 14293 Query 2125 AAAAATATATTCTTTTGGAAGTTTTTCCCTAATTATTGCCATTGCTGCCTCTTTCGAACC 2184 ||| | | | | | ||| | |||||| ||||| || | | ||| | || | || Sbjct 14294 AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGT 14353 Query 2185 TGCGTTTAACGCTTCTGCAGCTGCATCGTTAGCCGTCTGTTGACCTCCTCTAGCAGATCT 2244 || ||||||||||||||| | |||| || | || ||| ||||||||||||||||| Sbjct 14354 AGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCG 14413 Query 2245 TCCGTCGATCTGAAATACACCCCAGTCGACGTAATCACCGTCCTTCTCGATGTAGGACTT 2304 ||| ||||| ||||| ||||||||| |||||||| ||| ||| ||||||| ||| Sbjct 14414 TCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTT 14473 Query 2305 GACATCGGAACTGGACTTAGCTCCCTGGAAGTTTGGATGGAATTGTGTGGAGGTGTTGGG 2364 ||||| ||| || ||||| ||||||||||| ||| || ||| || || || Sbjct 14474 AACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAGG 14533 Query 2365 GTGTGTAATGTCGAAGTGTCGACTATTCCTGAATTGGGCTTTACCTTTGAATTGTATGAG 2424 || | || |||||||||| | || || ||||| || || |||| |||||| || || Sbjct 14534 ATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAG 14593 Query 2425 CGCGTGGAGATGCAGAGTCCCATCTGAGTGTTTTTCTTGTGCAACTCTGATAAATAATTT 2484 || ||| ||| | |||||| |||||||||||| ||||| ||| | ||| Sbjct 14594 GGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCT--AAAACAGTTT 14651 Query 2485 ATCAGAAGGGCACTGTATATTTTTAATAAGCTCTAAGGCTTCTTCTTTGGGAATTGGGCA 2544 || ||||| || | | ||| | |||||||| || ||||| |||| || || Sbjct 14652 ATTTGAAGGACAAGAAACCTGTTTCAAGTGCTCTAAGATTTGATCTTTAGGAAGAGGACA 14711 Query 2545 TTTCGGATAAGTGAGGAAGATATTTTTGGCTTTTACTTGAAATGAACTTGAA--CGAGGC 2602 ||| ||| | || || || || ||||| | ||||| || |||||| |||| | ||| Sbjct 14712 TTTTGGAAATGTAAGAAATATGTTTTTAGAATTTACCTGGAATGAA--TGAAGCCTTGGC 14769 Query 2603 ATTTTGACTAAGTCAATTGGGTGCTCTCAAACTTCTCTGGAATGGGGTGCTTTGGGTGC 2661 |||||| || | || ||||| ||| ||||| | || |||||||||||| || Sbjct 14770 ATTTTGTAGAAATGAAATGGGT--ACTCCGACTTCCTATGCATTGGGTGCTTTGGGAGC 14826 Score = 183 bits (202), Expect = 5e-43 Identities = 310/435 (71%), Gaps = 13/435 (3%) Strand=Plus/Plus Query 959 TCATACTGAAAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTA 1018 ||||||||||||||| ||||| |||||| || |||||||| |||||| || || Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1019 TGCTACTTTGAAGATCA-GAATCTATTTCTATGATTCTGT-TCAGAATTAATAAAGATTG 1076 | |||| ||| || || | | ||||| ||||| ||| ||| |||||||||| |||| Sbjct 13140 TTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTG 13197 Query 1077 AATTTTATTATATGAGAATTTGTTACATATTCTGTATTTTCCAATACATCCCATAATACA 1136 ||||||||| |||| | | ||||| |||| | || | ||||| |||||||| Sbjct 13198 AATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACA 13257 Query 1137 TGATC-ACATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATTTAAATATTT 1195 | || ||| |||||||| | ||||||||||||||| ||||| || | |||| |||| Sbjct 13258 TTGTCTACA-GCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1196 CAT-ACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCC 1254 ||| ||| ||| ||||||||||||||||| | ||| |||| |||| ||||||| Sbjct 13317 CATTACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1255 AGATCTGGAAGATCAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTGATTGA 1314 ||||| |||| | || ||| | ||| | || | |||||||||||||| |||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1315 ACTGTATTCTGATCGTTATGATGTCG-TGGTTGGTGTTGAATGGCCTCTCGTGGTGCTTG 1373 | | ||| || || |||||| | || | ||| ||| || | ||| ||| Sbjct 13436 ATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGT-TGGTCTGAGATTGTGGTTG 13494 Query 1374 ATTATCTTGAAATAT 1388 | |||||||||||| Sbjct 13495 AGGATCTTGAAATAT 13509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8636890458600