Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004634.1 Length=2731 Score E Sequences producing significant alignments: (Bits) Value seq19028 242 6e-61 >seq19028 Length=31091 Score = 242 bits (268), Expect = 6e-61 Identities = 261/343 (76%), Gaps = 7/343 (2%) Strand=Plus/Plus Query 1629 TTTCTCGTCGAGGAATTCTTTATAGCTGCTATTGGGACCAGGATTGCATAGGAAGATTGT 1688 || ||| |||||||| |||||||||||| | | |||||||||||||| | ||||||||| Sbjct 13833 TTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGT 13892 Query 1689 CGGTATCCCGCCTTTAATTTGAACTGGCTTCCCGTATTTT---GTGTTGGATTGCCAGTC 1745 ||||||||| || || || | || ||| | ||||||||| || |||| ||| | Sbjct 13893 CGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGA---CCAATT 13949 Query 1746 CCTTTGGGCCCCCATGAACTCCTTAAAGTGCTTAAGAAAGTGCGGGTCGACGTCATCAAT 1805 |||||||||||||| ||||| ||||||||||| ||| | ||||| ||||||| |||||| Sbjct 13950 GCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAAT 14009 Query 1806 GACGTTGTACCATGCGTCGTTGCTGTAGACCTTTGGACTCAGATCTAGATGCCCACACAG 1865 || ||| ||||| || | || || | || | ||| ||||| ||| || || || Sbjct 14010 GATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAG 14069 Query 1866 ATAGTTATGTGGGCCTAGTGACCTGGCCCACATTGTCTTCCCGGTTCGACTATCTCCCTC 1925 || |||||||| |||| || || |||||| ||||||||| |||| | || ||||| Sbjct 14070 GTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTC 14129 Query 1926 GATGACTATACTTTGAGGTC-TAAGGGGCCGCGCAGCGGCATC 1967 ||||| ||||| | |||| | | ||||||||||||||||| Sbjct 14130 AATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8627293913646