Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004635.2 Length=2608 Score E Sequences producing significant alignments: (Bits) Value seq19028 143 4e-31 >seq19028 Length=31091 Score = 143 bits (158), Expect = 4e-31 Identities = 249/355 (70%), Gaps = 18/355 (5%) Strand=Plus/Plus Query 1499 TTTTCCTCTTTGTTCAGGAAATCTTTATAGCTGGCACCCTCACCAGGATTGCAAAGCACG 1558 |||||||| | | ||||| ||||||||||||| | |||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1559 ATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTTGACTG--CC 1616 |||| || ||||| || || || | || ||| | |||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1617 AGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAGATATTGCGGTGCGA 1676 | | | |||||||||| || ||||| |||||||||| ||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGA 13999 Query 1677 CGTCATCAATGACGTTATATTCCA--CTTCATTTGAAAAGACCCGGGAATTGAAGTCTAA 1734 ||| |||||||| |||||| ||| | | ||||||| | | ||| || ||||| Sbjct 14000 CGTTATCAATGATGTTATA--CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAA 14057 Query 1735 GTGTCCACTGAGATAATTGTGTGGGCCTAAGGCACGAGCCCACATCGTCTTCCCTGTCCT 1794 || || | || ||||| ||||| ||||| | | |||||| ||||||||||| || Sbjct 14058 ATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCT 14117 Query 1795 CGAGTCGCCTTCAATTATGATACTCACAGG-CCTCTCCGGCCGCGCAGCGGCATC 1848 || || || ||||| | |||||| || | | ||||||||||||||||| Sbjct 14118 AGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Score = 95.1 bits (104), Expect = 2e-16 Identities = 257/382 (67%), Gaps = 26/382 (7%) Strand=Plus/Plus Query 827 GAATCATACGGAGAACGCCTTATTATTGTATATGGCATGTACTCATGCCTCTAACCCCGT 886 || |||||| || || || ||| |||||||| | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 887 GTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAATAAAATTT 946 ||| || ||| || || | ||||||||||| || |||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 947 AAATTTTATTTCATGATTTTCAAGCACAT---GAGTT---ACATATGGTTTGGCTGTTGC 1000 |||||||||||||||| |||||| |||| ||| || | ||| | | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1001 AAAACGAACAGCTCTAATTACATTGTTTATTCCAATTACACCTAATTGGTACAAGTA-CT 1059 | ||||||||||| | |||||| || | ||| ||||||||| ||| || | | Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1060 CATT-TACTAATTGTCCAAAT-CTAGCTAAATAA---GT-TGACCCAGAAGCTGTCATCG 1113 |||| || || | | |||| || || || || || || | || | || | || Sbjct 13317 CATTACACGAAATTT--AAATACT--CTTAAGAAAACGTATG--TCGGAGGACGTAAACG 13370 Query 1114 ATGTCGTCCAAACTTGGAAGTTCAGGTAGGCTTTGTGGAGACCCAACGCTCTCCTCAGGT 1173 | |||| | | |||||| ||| | |||||||| ||| || | ||||||||| Sbjct 13371 A----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGT 13426 Query 1174 TGTGGTTGAATCGTATCTGTAT 1195 ||||||||||||| || ||||| Sbjct 13427 TGTGGTTGAATCGAATTTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8233835570532