Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004637.1 Length=2668 Score E Sequences producing significant alignments: (Bits) Value seq19028 123 4e-25 >seq19028 Length=31091 Score = 123 bits (136), Expect = 4e-25 Identities = 249/362 (69%), Gaps = 18/362 (5%) Strand=Plus/Plus Query 1570 ATTCTCTTCTTTGTCGAGGAATTCTTTATAACTGACTCCCTCCCCAGGATTGCAGAGCAC 1629 ||| | ||| | |||||||| |||||||| ||| ||||||||||| | | Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1630 GATTGATGGTATTCCACCTTTAATTTGAACTGGCTTTCCGTAACTTAACAATTTGACTG- 1688 ||||| ||||| ||||| || || | || ||| ||||||| ||| | ||| ||| Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACC---TTG-CTGG 13942 Query 1689 -CCAGTCTTTTTGAGCACCAATCAGCTCCCTTCCAGTGCTTTAACTTTAGATATTGGGGT 1747 ||| | |||| || || || | ||| || ||||||||| |||| || || Sbjct 13943 ACCAATTGCTTTGGGCCCCCATAAACTCT-TTAAAGTGCTTTA------GATAATGCGGA 13995 Query 1748 GTGACATCATCGATGACGTTGTATTCCA--CTTCGTTTGAATAGACCTTAGAATTGAAGT 1805 ||| | ||| |||| ||| || ||| | | |||||||| | ||| ||| || | Sbjct 13996 TCGACGTTATCAATGATGTTATA--CCAGGCATTATTTGAATAAATTTTATTATTCAAAT 14053 Query 1806 CCAGATGTCCACTCAAGTAATTATGTGGGCCTAACGAACGAGCCCACATTGTCTTCCCTG 1865 | | ||| || | | |||||||||||| ||||| || | |||||| ||||||||||| Sbjct 14054 CTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTG 14113 Query 1866 TCCTTGAATCACCTTCGACTATCAAACTCATAGGTC-TCAATGGCCGCGCAGCTGAACCC 1924 | || || ||||| || | | | |||| | |||| | |||||||||||||| | | || Sbjct 14114 TTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCC 14173 Query 1925 CT 1926 || Sbjct 14174 CT 14175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8425766469612