Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004638.1 Length=2582 Score E Sequences producing significant alignments: (Bits) Value seq19028 194 3e-46 >seq19028 Length=31091 Score = 194 bits (214), Expect = 3e-46 Identities = 494/745 (66%), Gaps = 30/745 (4%) Strand=Plus/Plus Query 1431 TGTGAGGGTGATGAAGACCGCATTCTTGAGAGTCCAGTTTTTGAGAGACGCATTTTCTAT 1490 ||||| |||| ||| | ||||| | | || ||| ||||| | ||||| | Sbjct 13776 TGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTC 13835 Query 1491 TTTCTCGAGGAAAGCTTTATAGCTGGAACCCTCGCCAGGATTGCAGAGCACGATTGATGG 1550 | ||||||||| |||||||||||||| ||||||||||| | | ||||| || Sbjct 13836 CTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGG 13895 Query 1551 GATCCCTCCTTTAATTTGAACGGGCTTTCCGTACTTGCAATTTGATTG-CCAATCTTTTT 1609 ||||| || || || | || ||| ||||||| || | ||| | | ||||| ||| Sbjct 13896 TATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTT 13954 Query 1610 GGGCCCCGAGAAGTTCTTTCCAGTGCTTTAACTTTAGGTATTGCGGTGCGACGTCATCAA 1669 ||||||| | || ||||| ||||||||| | || ||||| |||||| ||||| Sbjct 13955 GGGCCCCCATAAACTCTTTAAAGTGCTTTA------GATAATGCGGATCGACGTTATCAA 14008 Query 1670 TGACGTTATACTCCACTCCATTCGAATAGACCCTAGAATTGAAATCGAGATGACCGCTCA 1729 ||| ||||||| | ||| ||||| | || ||| ||||| | |||||||| | Sbjct 14009 TGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATA 14068 Query 1730 AGTAATTATGTGGGCCTAAGACCCGTGCCCACATCGTCTTGCCCGTTCGAGAGTCACCCT 1789 |||||||||||| ||||| | ||||||| ||||| || |||| ||| ||||||| Sbjct 14069 GGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCT 14128 Query 1790 CAATTATGATACTAATAGGTC-TCTCCGGCCGCGCAGCGGCACCCCTTCCGAAATAATTA 1848 |||| | ||||| | |||| | ||||||||||||||| |||| | || | | Sbjct 14129 CAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---AACATTTTCA 14185 Query 1849 TCTGCCCACTCTTGCATCTCGTCAGGCACGTTAGTGAAAGAAGAGAGTTGAAACGGAGGA 1908 ||||||| ||| ||| || |||| ||||| ||| ||| | Sbjct 14186 GCTGCCCA-----GCA-CTC--------AATTGTTGAAGGAAGAACAACTAAAAGGACTA 14231 Query 1909 ACCCACGGTTCTGGAGCCTTGGTAAATATTTTAGCTGCGTTAGCAACAAGATTATGATGT 1968 || | ||||| |||| | |||||| | || || | ||| | |||||||| | Sbjct 14232 ACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 1969 TGAAGGAAAAAGTGTTGTGG--TTGTTCCTCCTTAATAATTTGCAGAGCTTCTGCGGCAG 2026 |||| | ||| | | ||| || || ||| ||||||| || |||||| | | Sbjct 14292 TGAAATAGAAACTTTGCTGGCATTTTTTCTC--TAATAATAGAAAGCGCTTCTTCAATTG 14349 Query 2027 ATGCAGCATTCAACGCCTTGGCATATGTATCGTTAACTGACTGTTGACCTCCTCTAGCAG 2086 ||| |||| | ||||| | ||| || ||| || || ||| |||||||||||||| Sbjct 14350 ATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAG 14409 Query 2087 ATCTGCCGTCGATCTGGAATTCTCCCCATTCAACTGAATCTCCGTCCTTGTCGATATAGG 2146 ||| || ||||| || || | ||||| || |||| | ||| || |||| || Sbjct 14410 ATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATT 14469 Query 2147 ACTTGACGTCGGAGCTCGATTTAGC 2171 ||| || || || |||||||| Sbjct 14470 TCTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8150665514264