Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004639.1 Length=2661 Score E Sequences producing significant alignments: (Bits) Value seq19028 136 7e-29 >seq19028 Length=31091 Score = 136 bits (150), Expect = 7e-29 Identities = 244/347 (70%), Gaps = 17/347 (5%) Strand=Plus/Plus Query 1585 TCGAGGAACTCTTTATAACTGACTCCCTCCCCAGGATTGCAGAGCACGATTGATGGGATT 1644 ||||||||||||||||| ||| ||||||||||| | | ||||| || || Sbjct 13840 TCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATC 13899 Query 1645 CCACCTTTAATTTGAACTGGCTTTCCGTACTTACAATTTGACTG--CCAGTCTTTTTGAG 1702 ||||| || || | || ||| ||||||| || | ||| ||| ||| | |||| | Sbjct 13900 CCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACCAATTGCTTTGGG 13957 Query 1703 CACCAATCAGCTCCTTCCAGTGCTTTAACTTTAGATATTGCGGAGTGACATCATCAATGA 1762 | || || | ||| || ||||||||| |||| |||||| ||| | |||||||| Sbjct 13958 CCCCCATAAACTCTTTAAAGTGCTTTA------GATAATGCGGATCGACGTTATCAATGA 14011 Query 1763 CGTTATAATCCA--CTTCGTTTGAGTAAACCCTATTATTGAAGTCCAGATGTCCACTTAA 1820 |||||| ||| | | ||||| |||| ||||||| || || | ||| || | || Sbjct 14012 TGTTATA--CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAG 14069 Query 1821 GTAATTATGTGG-GCTAATGCACGAGCCCACATCGTCTTTCCCTGTCCTTGAATCACCTT 1879 |||||||||||| |||| | | |||||| ||| |||||||| || || ||||| | Sbjct 14070 GTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTC-TTCCCTGTTCTAGACTCACCCT 14128 Query 1880 CCACTATCAAACTCATAGGTC-TCAATGGCCGCGCAGCGGAACCCCT 1925 | | | | |||| | |||| | |||||||||||||||| | |||| Sbjct 14129 CAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8403374531386