Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004642.1 Length=2593 Score E Sequences producing significant alignments: (Bits) Value seq19028 167 4e-38 >seq19028 Length=31091 Score = 167 bits (184), Expect = 4e-38 Identities = 289/416 (69%), Gaps = 12/416 (3%) Strand=Plus/Plus Query 1459 GAATTTTGCATTGTGGAGTGTCCAATCTTTTAGTGCTTTGTTTTCCTCTTTTTCGAGGAA 1518 ||||| |||||| || | | ||||| ||||| | | |||| || | |||||||| Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAA 13847 Query 1519 ACTTTTATAGCTGGCCCCCTCACCAGGATTGCAGAGCACGATTGACGGTATTCCCCCTTT 1578 ||||||||||| |||||||||||| | | ||||| |||||| || || || Sbjct 13848 CTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTT 13907 Query 1579 AATTTGAACTGGCTTCCCGTATTTGCAATTTGATTG-CCAGTCCTTTTGGGCCCCAATCA 1637 || | || ||| | |||||||| | ||| | | ||| | |||||||||| || | Sbjct 13908 TATCTTTACAGGCCTTCCGTATTT-TACCTTGCTGGACCAATTGCTTTGGGCCCCCATAA 13966 Query 1638 GCTCTTTCCAATGCTTCATCTTTAAATATTGCGGAGTGATGTCATCAATGACGTTGTATT 1697 |||||| | || ||||| ||| |||||| || || |||||||| ||| || Sbjct 13967 ACTCTTTAAAGTG------CTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACC 14020 Query 1698 CCGCTTCATTTGAGTAAACCCTAGAATTGAAATCTAGGTGTCCACTCAAATAATTGTGTG 1757 || | |||||| |||| || ||| ||||||| || || | | ||||| |||| Sbjct 14021 AGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTG 14080 Query 1758 GGCCTAAGGCACGCGCCCACATTGTCTTTCCCGTCCTCGATTCACCCTCGATGATTATAC 1817 | ||||| | | |||||| |||||| || || || || |||||||| |||| |||| Sbjct 14081 GTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATAC 14140 Query 1818 TTATAGGTC-TCTCCGGCCGCGCAGCGGCATCCCTACCAAAATAATCATCTGCCCA 1872 | | |||| | |||||||||||||||||||| || || ||| ||||||| Sbjct 14141 TCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---AACATTTTCAGCTGCCCA 14193 Score = 129 bits (142), Expect = 1e-26 Identities = 251/366 (69%), Gaps = 35/366 (10%) Strand=Plus/Plus Query 852 TTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCTACTCTTAAGATCCGG 911 || |||||||| | |||||||| ||||| ||||| ||| |||| | | | || Sbjct 13099 TTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATATTGTACTATGAGAACACGC 13158 Query 912 ATCTATTTTTATGATTCGGTATTGAATTAATAAAATTTGAATTTTATTGAATGATTTTCC 971 | ||||||||||| |||| |||||||||| |||||||||||| ||||| ||| Sbjct 13159 AGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAATTTTATTTCATGATATTCA 13218 Query 972 AGTACATG------------AGATACAT--ACGACCTGTTTGTCGCGAATCGTACAGCTC 1017 ||||||| | ||||| | | ||||| |||||||| Sbjct 13219 AGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTGTC--------TACAGCTC 13270 Query 1018 TGATAACATTGTTAATGCAAATAACACCTAACCTATCTAAATACA--ATAAGACTAAATA 1075 | |||| ||||||||| | |||||||||||| | |||||| | || | || |||| Sbjct 13271 TAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATTACACGAAAT- 13329 Query 1076 TTTAAATCTACTTAAGTAA--GTC-GTCCCAGAAGCTTGAACTGATGTCGTCCAGATTTG 1132 |||||| |||||| || || ||| || | | | ||| || |||| ||| | Sbjct 13330 -TTAAATACTCTTAAGAAAACGTATGTCGGAGGA-CGTAAAC-GA----GTCCTGATCTT 13382 Query 1133 GTAGTTGAGGTAGGCTTTGTGTAGACTCAGCGCCTTCCTGAGGTTGTGGTTGAACCGTAT 1192 | |||||||| | |||||||| ||| |||| ||||||| |||||||||||||| || || Sbjct 13383 GAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGAAT 13442 Query 1193 TTGGAT 1198 ||| || Sbjct 13443 TTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8185852845762