Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004647.1 Length=2756 Score E Sequences producing significant alignments: (Bits) Value seq19028 307 2e-80 >seq19028 Length=31091 Score = 307 bits (340), Expect = 2e-80 Identities = 736/1105 (67%), Gaps = 90/1105 (8%) Strand=Plus/Plus Query 962 GAATCATAGTGAGAATGCGTTGATGTTGTATATGGCATGTACTCATGCCTCAAACCCTGT 1021 || ||||| ||| ||||| ||| |||||||| | |||||||| || || ||||| Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1022 GTATGCTACTCTGAAAATACGGATCTATTTCTACGATTCGGTGACAAATTAATAAAGATT 1081 ||| |||| ||| || ||| | ||||| || || || |||||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1082 AAATTTTATT--ATGTTAG--AACTTTGTACATACATTGTTTGCGTTAATACATTCCATA 1137 ||||||||| ||| || || |||||| || ||||||| | |||||| ||| Sbjct 13197 GAATTTTATTTCATGATATTCAA----GTACATCCACTGTTTGCTCAATTACATTGAATA 13252 Query 1138 ATACATGATCGACAGCCCTAAGTACATTGTTTATGCTAATTACATCTAAATTTTTGATAA 1197 |||||| || ||||| |||| | |||||| || ||||| ||| |||| | | || Sbjct 13253 ATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAA 13312 Query 1198 ATTGCAACACTTGGGTTCTAAATACCCTTAAGAAATGACCAGTCTGAGGCTGTAAGGTCG 1257 ||| || || | | ||||||| ||||||||| ||| |||| |||| | Sbjct 13313 ATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAG 13372 Query 1258 TCCAGATTCGGAATGTTAGAAAACATTTGTGTATCCCCAACGCTTTCCGAAGGTTGTGGT 1317 ||| ||| ||| | || ||| |||||| | || | |||| |||||||||| Sbjct 13373 TCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGT 13432 Query 1318 TGAACTGAACCCTTACAGTT--ATCAGGTCTGTGTTCGAGTTGAATGGCCGGTTGTCGTG 1375 |||| ||| || | || || | ||| || |||| || ||| | | | ||| Sbjct 13433 TGAATCGAAT--TTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTG 13490 Query 1376 GTTGAGGATCTTGAAATATAGGGG--------ATTTGGGACCTGCGAGAT---------- 1417 ||||||||||||||||||||| |||| | | | | | Sbjct 13491 GTTGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAAC 13550 Query 1418 -ACT-GACGCCATTCATTGCCTGAACTGCAGTTATGTGTTCCCCTGTGCGTAAATCCATG 1475 ||| |||||||||||| || || ||||| |||| |||||||||||||| ||||||| Sbjct 13551 GACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATG 13610 Query 1476 GTTCCTG--CAGTTGATGCTTAGGTAATAT-GAACAACCACACTCAAGGTCTATTC-TCT 1531 || | ||| | || || | ||||| ||||| ||||| ||||||| || ||| Sbjct 13611 A--CCAGAACAGCTAATATTTTTG-AATATTGAACATCCACAAGGCAGGTCTAGTCGTCT 13667 Query 1532 TCCTCCTGATTG---TCTTCTTG------------------------GCTTGCCTGTGGA 1564 || || ||||| |||||||| |||| ||| || | Sbjct 13668 TCTTC-TGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCT-TGTA 13725 Query 1565 GAACCT---TG-----ATTGGTA--------CCTGA--GTATAGTGGCCCTGCGAGGGTG 1606 || | || ||||| | |||| | ||| ||| || || |||| Sbjct 13726 TAATGTCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTG 13785 Query 1607 ACGAAGATCGCATTCTTGAGTGCCCAATTTCTTAGTGCGGAATTCTTTTCTTCGTCCAAG 1666 ||| ||||| | | | ||||||| ||| | ||| ||||| || || | | Sbjct 13786 TAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGG 13845 Query 1667 AACTCTTTATAGCTGGAGTTGGGCCCTGGATTGCATAGGAATATAGTGGGAATGCCTCCT 1726 ||||||||||||||||| | || || |||||||| | ||| || || || || || || Sbjct 13846 AACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCC 13905 Query 1727 TTAATTTGAACTGGCTTTCCGTATTTGGTATTGCTTTGCCAGTCCCTTTGGGCCCCCATG 1786 || || | || ||| |||||||||| ||||| ||| | |||||||||||||| Sbjct 13906 TTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATA 13965 Query 1787 AACTCTTTAAAGTGCTTCAAATAATGCGGATCGACATCATCAATGACGTTATACCATGCG 1846 ||||||||||||||||| | ||||||||||||||| | |||||||| ||||||||| || Sbjct 13966 AACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCA 14025 Query 1847 TCATTTGAATACACTCTTGGGCTTAAGTCCAAATGGCCGCACAAGTAATTGTGTGGGCCG 1906 | ||||||||| | | | | || || ||||| ||||| | |||||| ||||| || Sbjct 14026 TTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCT 14085 Query 1907 ATGGACCTAGCCCACATTGTTTTGCCCGTACGACTATCACCCTCAACAATAATTCCTATG 1966 | || || |||||| ||| || || || | | |||||||||| | ||| | || Sbjct 14086 AAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTG 14145 Query 1967 GGTC-TTATAGGCCGCGCAGCGGCA 1990 |||| ||| ||||||||||||||| Sbjct 14146 GGTCGTTAATGGCCGCGCAGCGGCA 14170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8707265121596