Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004654.1 Length=2761 Score E Sequences producing significant alignments: (Bits) Value seq19028 179 6e-42 >seq19028 Length=31091 Score = 179 bits (198), Expect = 6e-42 Identities = 309/439 (70%), Gaps = 11/439 (3%) Strand=Plus/Plus Query 968 GAATCATACTGAAAATGCTTTATTATTGTATATGGCTTGTACACATGCCAGTAATCCTGT 1027 || ||||||||||||||| ||| |||||||| || || ||||| ||||||||| Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1028 GTATGCTACTCTAAAGATCAG--AGTGTATTTCTACGATTCAGTATAAAATTAATAAAGT 1085 ||| |||| | | || || ||| ||||| || || |||| ||||||||||| Sbjct 13137 ATATTGTACTATGA-GAACACGCAGT-TATTTTTATGAGAGTGTATCAAATTAATAAATA 13194 Query 1086 TTGAATTTTATATCACTTGATTGTTGTACATACTGTGTTCCTCTCAA-TACATCGTATAA 1144 ||||||||||| ||| ||| |||||| | |||| ||||| ||||| | |||| Sbjct 13195 TTGAATTTTATTTCATGATATTCAAGTACATCCACTGTT-TGCTCAATTACATTGAATAA 13253 Query 1145 TACATAATCAACTGCCCTAATTACATTGTTAATTGAAATTACACCCAAATTATCTAAATA 1204 ||||| || || || ||||| | ||||||||| ||| ||||| || |||||| | Sbjct 13254 TACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAA 13313 Query 1205 CTCTAGTACACGTTTACTAAATACATTCAAGAAATAAGAAGTCAGAGGTTGTAAGTGAGT 1264 | | |||||| ||||||| | |||||| | ||| |||| |||| |||| Sbjct 13314 TTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGT 13373 Query 1265 CCAGATCTTGAAGGTCAGGAAGCACTTGTGTAGATCCAGTTGAGATCTGAGGTTGTGGTT 1324 || |||||||||| | ||||| ||||| |||| ||||| || ||||||||||| Sbjct 13374 CCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTT 13433 Query 1325 GAACTGAATCTGTATTGTTATTATGTC-CTGATCCATGTTGAACGGTCGTTGAGCGTGGT 1383 ||| |||| |||||| |||||||| | || | ||| |||| || ||||| Sbjct 13434 GAATCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTG-TTGGTCTGAGATTGTGGT 13492 Query 1384 TCGTGATTTTGAAATATAG 1402 | ||| ||||||||||| Sbjct 13493 TGAGGATCTTGAAATATAG 13511 Score = 178 bits (196), Expect = 2e-41 Identities = 242/336 (72%), Gaps = 4/336 (1%) Strand=Plus/Plus Query 1691 GACGTTGGGCCTGGATTGCAGAGGAAGATTGTTGGGATACCACCTTTAATTTGAATTGGT 1750 || || || || |||||||| | ||||||||| || || ||||| || || | | || Sbjct 13861 GAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGC 13920 Query 1751 TTCCCGTACTTGGTGTTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCTTTAAAGTGC 1810 | ||||| || ||||| ||| | |||||||||||||| || |||||||||||| Sbjct 13921 CTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGC 13980 Query 1811 TTTAGATAGTGGGGATCCACGTCATCAATCACGTTGTACCAAGCACTGTTGCTGTAAACC 1870 |||||||| || ||||| |||| |||||| | ||| ||||| ||| | || |||| Sbjct 13981 TTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATT 14040 Query 1871 TTGGGGCTTAAGTCAAGATGGCCGCAAAGGTAATTGTGATGTGGGCTCAACGACCTGGCC 1930 || | || || | ||| ||||| |||||||| |||||| | || || || ||| Sbjct 14041 TTATTATTCAAATCTAAATGACCGCATAGGTAATT---ATGTGGTCCTAAAGATCTTGCC 14097 Query 1931 CACATGGTCTTCCCTGTCCTGCTATCCCCTTCAATCACAATGCTTATGGG-CCTCCACGG 1989 ||| ||||||||||| || || || ||||| ||||| || |||| | | | || Sbjct 14098 CACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGG 14157 Query 1990 CCGCGCAGCGGAATCCCTGGCGTTCTCTGCAGCCCA 2025 ||||||||||| |||||| | || || || ||||| Sbjct 14158 CCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8723259363186