Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004657.1 Length=2605 Score E Sequences producing significant alignments: (Bits) Value seq19028 125 1e-25 >seq19028 Length=31091 Score = 125 bits (138), Expect = 1e-25 Identities = 211/300 (70%), Gaps = 14/300 (5%) Strand=Plus/Plus Query 1661 TCCAGGAAATCTTTATAACTGGCACCCTCACCAGGATTGCAAAGCACGATTGATGGGATT 1720 || ||||| |||||||| |||| | |||||||||||| | | ||||| || || Sbjct 13840 TCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATC 13899 Query 1721 CCTCCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTTGACTG--CCAGTCCCTTTGGG 1778 || || || || | || ||| | |||||||| | ||| ||| ||| | ||||||| Sbjct 13900 CCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACCAATTGCTTTGGG 13957 Query 1779 ACCCGATTAATTCTTTCCAGTGCTTTAACTTTAGATAGTGCGGTGCGACGTCATCAATGA 1838 ||| || || ||||| ||||||||| |||| ||||| |||||| |||||||| Sbjct 13958 CCCCCATAAACTCTTTAAAGTGCTTTA------GATAATGCGGATCGACGTTATCAATGA 14011 Query 1839 CGTTATATTCCA--CTTCGTTTGAGAACACTCTGGAATTGAAGTCTAGGTGTCCACTAAG 1896 |||||| ||| | | ||||| | | | | ||| || |||| || || | || Sbjct 14012 TGTTATA--CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAG 14069 Query 1897 ATAATTATGTGGGCCTAATGCCCGAGCCCACATCGTCTTCCCTGTTCTTGAATCACCTTC 1956 ||||||||||| ||||| | | |||||| |||||||||||||| || ||||| || Sbjct 14070 GTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTC 14129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8224239025578