Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004659.1 Length=2603 Score E Sequences producing significant alignments: (Bits) Value seq19028 150 3e-33 >seq19028 Length=31091 Score = 150 bits (166), Expect = 3e-33 Identities = 458/695 (66%), Gaps = 37/695 (5%) Strand=Plus/Plus Query 1642 TTTTCCTCTTTGTCGAGGAAATCTTTATAGCTGGCACCCTCACCAGGATTGCAAAGCACG 1701 |||||||| | ||||||| ||||||||||||| | |||||||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1702 ATTGATGGGATCCCTCCTTTTATCTGAACGGGCTTGCCGTATTTGCAATTTGACTG--CC 1759 |||| || ||||| || ||||||| || ||| | |||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTT-TACCTTG-CTGGACC 13945 Query 1760 AGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGTTTTAGCTTTAGATAGTGCGGTGCGA 1819 | | | |||||||||| || ||||| ||| |||||||||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGT------GCTTTAGATAATGCGGATCGA 13999 Query 1820 CGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAGACTCGTGGGTTGAAGTCCAG 1877 ||| |||||||| |||||| ||| | | || || || | | || || || | Sbjct 14000 CGTTATCAATGATGTTATA--CCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAA 14057 Query 1878 ATGTCCACTAAGATAGTTATGTGGGCCTAAGGCACGAGCCCACATCGTCTTCCCTGTTCT 1937 ||| || | || || |||||||| ||||| | | |||||| |||||||||||||| Sbjct 14058 ATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCT 14117 Query 1938 CGAATCACCTTCCACTATGAGACTCATTGGTC-TATCTGGCCGCGCAGCAGAACCTCTCC 1996 || ||||| || | | | |||| | |||| | |||||||||||| | | | || Sbjct 14118 AGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC---CC 14174 Query 1997 CAAAATATTCATCGGCCCACTCTTGCATATCGTCTGGCACGTTAGTGAACGAGGATAGGG 2056 || || |||| | ||||| ||| || || || |||| || || Sbjct 14175 TAACATTTTCAGCTGCCCA-----GCA------CT--CA-ATTGTTGAAGGAAGAACAAC 14220 Query 2057 GAAACGGAGGAGCCCATGGTTCCGGAGCCTTTTGGAATATTTTGGTGGCGTTTGCAACTA 2116 ||| ||| | | | ||||| |||| ||||||| |||| ||||| Sbjct 14221 TAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTA 14280 Query 2117 AGTTATGATGTTGAAGGAAGAAATGCTG-TGGTTGTTCTTCCCTGATTATTCGCAGAGCT 2175 ||||||| ||||| ||||| || ||| || ||| || || || || ||| Sbjct 14281 TATTATGATATTGAA-ATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCT 14339 Query 2176 TCCTCTGCACATGTTGCATTTAACGCCTTGGCATATGTGTCGTTAGCTGTCTGCTGGCCT 2235 || || |||| ||| ||||||| | ||| || || || | ||| || ||| Sbjct 14340 TCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCT 14399 Query 2236 CCTCTAGCAGATCTGCCGTCGATTTGGAATTGCCCCCATTCAATAGTATCGCCGTCCTTG 2295 ||||||||||||| || |||||||| || | ||||| || | ||| | ||| || Sbjct 14400 CCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTC 14459 Query 2296 TCGATGTAGGACTTGACGTCGGAGCTTGATTTAGC 2330 ||||||| ||| || || || ||||||||| Sbjct 14460 GCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8217841328942