Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004661.1 Length=2612 Score E Sequences producing significant alignments: (Bits) Value seq19028 127 3e-26 >seq19028 Length=31091 Score = 127 bits (140), Expect = 3e-26 Identities = 258/377 (68%), Gaps = 17/377 (5%) Strand=Plus/Plus Query 1651 TTTTCCTCTTTGTTCAGGAAATCTTTATAGCTGGCACCCTCACCAGGATTGCAAAGCACG 1710 |||||||| | | ||||| ||||||||||||| | |||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1711 ATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTGCCGTACTTACAATTTGACTG--CC 1768 |||| || ||||| || || || | || ||| | ||||| || | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1769 AGTCCTTCTGGCCCCAGAAAGATTCTTTCCAGTGCTTTAGCTTTAGATATTGCGGTGCGA 1828 | | | ||| ||| | | | ||||| |||||||||| ||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGA 13999 Query 1829 CGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCTTGGGTTGAAGTCCAGAT 1888 ||| |||||||| ||||||| | | || ||||| | | | || || || | || Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1889 GTCCACTAAGATAATTATGTGGGCCTAACGCACGAGCCCACATCGTCTTCCCTGTTCTCG 1948 | || | || ||||||||||| ||||| | | |||||| |||||||||||||| | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1949 AATCACCTTCCACGATGATACTAACAGGTC-TCTCTGGGCGCGCAGCGGAATCACACCCA 2007 | ||||| || | || ||||| |||| | ||| |||||||||| ||| || | Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC---CCTA 14176 Query 2008 AAATAATCATCCGCCCA 2024 | || ||| | ||||| Sbjct 14177 ACATTTTCAGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8246630963804