Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004675.1 Length=2766 Score E Sequences producing significant alignments: (Bits) Value seq19028 242 6e-61 >seq19028 Length=31091 Score = 242 bits (268), Expect = 6e-61 Identities = 486/713 (68%), Gaps = 18/713 (3%) Strand=Plus/Plus Query 1652 TATTCTTATCCTCATCGAGATATTCTTTATATGAGGATGTTGGGCCTGGATTGCAGAGGA 1711 |||| || ||||| ||||| | |||||||| ||| || || || |||||||| | || Sbjct 13826 TATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGA 13885 Query 1712 AGATAGTGGGAATGCCGCCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCC 1771 |||| || || || || || || || | | || | ||||| || ||||| || Sbjct 13886 AGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACC 13945 Query 1772 AGTCCCTTTGGGCCCCAAAGAATTCCTTCCAGTGCTTTAGGTAATGCGGATCTACGTCAT 1831 | | ||||||||||| | || || || |||||||||| ||||||||||| |||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTAT 14005 Query 1832 CAATGACGTTATACCAAGCGTCATTAGAATATACCTTTGGACTTAAGTCTAAATGACCAC 1891 |||||| ||||||||| || | ||| ||||| | || | | || ||||||||||| | Sbjct 14006 CAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGC 14065 Query 1892 ATAAGTAATTATGTTGCCCTAATGATCTAGCCCAAATAGTTTTGCCGGAACGACTATCGC 1951 ||| |||||||||| | ||||| ||||| ||||| || || || | | | || | Sbjct 14066 ATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCAC 14125 Query 1952 CCTCTATTACAATACTATTGGGTC-TCCAAGGCCGCGCAGCGGCACCACACACATTCTCA 2010 |||| || |||||||| ||||||| | | ||||||||||||||| | | ||||| ||| Sbjct 14126 CCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCA 14185 Query 2011 GAGACCCACTCTTCAAGTTCCTCAGGGACTTGATCAAAAGAAGATGAAGAAAAAGGAGAA 2070 | |||| || ||| | ||| | || ||||| || ||||||| | Sbjct 14186 GCTGCCCA----GCA-----CTC----AATTG-TTGAAGGAAGAACAACTAAAAGGACTA 14231 Query 2071 ATATAAGGCTCTGGGGGAGCCTGGAAAATCCTATCTAAATTAGTCTTTAAATTATGATAC 2130 | |||||| || || || | | ||| || | |||||| || | || ||||||||| Sbjct 14232 ACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 2131 TGAAAAATAAAATCTTTAGGGAGTTTTTCCCTAATAATAGCCATAGCGGCTTCAGCGGAA 2190 ||||| | ||| | | || | |||||| |||||||||| | || ||||| || Sbjct 14292 TGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGAT 14351 Query 2191 CCTGCGTTTAAAGCGTCGGCGCATGCGTCGTTAGCATTTTGGCAGCCTCCTCTAGCACTT 2250 || |||| || || || || | || || | | || | |||||||||||| | Sbjct 14352 GTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGAT 14411 Query 2251 CTGCCGTCGACCTGGAATTCTCCCCATTCAAGTGT-GTCTCCATCCTTGTCGATGTAGGA 2309 | || |||| || || | ||||| || |||| || | || || ||||||| Sbjct 14412 CGTCCATCGATTTGAAAATTGCCCCAGTC-GGTGTAATCACAGTCTTTCGCGATGTATTT 14470 Query 2310 CTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTG 2362 ||| || || || |||||||| || | |||||| ||| ||||| || Sbjct 14471 CTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG 14522 Score = 183 bits (202), Expect = 5e-43 Identities = 273/383 (71%), Gaps = 7/383 (2%) Strand=Plus/Plus Query 968 CATACCGAGAATGCGTTGTTGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTAT 1027 ||||| || ||||| |||| ||||||| | || ||||| ||||||||||| ||| Sbjct 13084 CATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1028 GCCACGTTAAAAATACGTGTATATTTTTATGACTCAGTG-AT-GAATTAATAAATATTAA 1085 || | | || ||| ||||||||||| |||| || |||||||||||||| | Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGA--GAGTGTATCAAATTAATAAATATTGA 13198 Query 1086 ATTTTATTTCATGTGTCTCAACAACATCGATAGTGTTTACAAGTACATTATAAAGTACAT 1145 ||||||||||||| |||| ||||| | || | ||| |||||| | | ||||| Sbjct 13199 ATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1146 GATCAACTGCTCTAATTACATTGTTAATTGAAATTACACCCAAATTATCTAAATACTTAA 1205 || || |||||||| | ||||||||| ||| ||||| || |||||| | || | Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1206 AAACTTGAAATTTAAATACGCTTAAGAAACGACCAGTCTGAGGCTGTAAGGTCGTCCAGA 1265 || ||||||||||||| ||||||||| ||| |||| |||| |||| || Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1266 CTTGGAAGTTGAGAAAACATTTGTGAATCCCCAGTTCCTTCCGGAGGTTGTGGTTGAACC 1325 | ||||||||| ||| |||||||| ||||||||||| |||||||||||||| | Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1326 GTATCTGGATCGATATGATGTCG 1348 | || || || || |||||| Sbjct 13439 GAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8735962249295