Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_004824.1 Length=2742 Score E Sequences producing significant alignments: (Bits) Value seq19028 592 3e-166 >seq19028 Length=31091 Score = 592 bits (656), Expect = 3e-166 Identities = 1169/1714 (68%), Gaps = 124/1714 (7%) Strand=Plus/Plus Query 945 GAATCATACTGAAAATGCATTAATGTTGTATATGGCCTGTACTCACGCATCGAACCCTGT 1004 || |||||||||||||||||| ||||||||| | ||||| ||||| || ||||| Sbjct 13080 GACTCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1005 ATATGCAACTCTGAAAATCCGGATCTATTTTTATGATTCGGTAACAAATTAATATATATT 1064 |||| ||| ||| || || | ||||||||||| ||| |||||||||| ||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1065 CACTTTCACATCATACGAGCTTCT--TACATCAATTGTTCTTTCCAATACATTGTCTAAA 1122 | ||| | |||| || ||| |||||| | |||| || | ||||||| ||| Sbjct 13197 GAATTTTATTTCAT--GATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAAT 13254 Query 1123 ACATGATAAACAGATCTTATTACATTGTAAATAGAGAGCACCCCTAACATATCCAGGTAC 1182 |||| | |||| ||| || | ||||| |||| | || ||||| || | | Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1183 TTAAGGACCTGGGTTTTAAAGACTCTCAAGAAAATCCCAATCGGAGGGCGTAAGCCCGTC 1242 || | || | |||||| ||||| ||||||| ||||||| ||||| | ||| Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1243 CAGATTTGGAAAGTTAGAGCACAC--TTGTGAAGTCCCAGCGCTTTCCTCAGGTTGTGGT 1300 | ||| | ||| ||| ||| | | |||||||| ||| | |||||||||||||||| Sbjct 13375 CTGATCTTGAA-GTT-GAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGT 13432 Query 1301 TGAACAGTATCTGTACCACTATTATGTCGTGTTCTGTCATGAA-----GGGTCGGCTGTC 1355 |||| | || |||| | ||||||||| || |||| ||| |||| | | Sbjct 13433 TGAATCGAATTTGTATTTCGATTATGTCG-GT--TGTC--GAATTTGTTGGTCTGAGATT 13487 Query 1356 GTGTTTCAATATTTTGAAATACAG-GGGATTTGGAATTTCCCAAATA------------- 1401 ||| || | || |||||||| || | | |||||||||||| Sbjct 13488 GTGGTTGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTA 13547 Query 1402 ------AAGACGCCACTCTCTGCTCGATCCGCAGTGATGTACTCCCCTGTGCGTGAATCC 1455 |||||||| || ||| | | ||||||||||| |||||||||||| |||| Sbjct 13548 AACGACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCC 13607 Query 1456 GTGATCATGGCAGTTTATTGACATGTAATA-CGAGCATCCGCACCGCAGATCAATCCGTT 1514 ||| || ||| | || || |||| || ||||| || |||| || | ||| Sbjct 13608 ATGACCAGAACAGCTAATATTTTTG-AATATTGAACATCCACAAGGCAGGTCTAGTCGTC 13666 Query 1515 TGCGTCTGATGTTCCTCTTCTTCTTCTGTGG----------GAG--------CGTTGTTT 1556 | | |||||| | |||||||| | | || ||| | |||| | Sbjct 13667 TTCTTCTGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTAT 13726 Query 1557 GA-------GCGACC---GGAAT----------------AGAGTGGTTCTTCGA-GTTGG 1589 | || || || || | | ||||| | || | || Sbjct 13727 AATGTCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGT 13786 Query 1590 ATGAAGACTGCATTCTTTATTGCCCACTGTTTTAGTGCTGAAt--ttttttCTTCGTCCA 1647 | ||| ||||||| | | | ||| | ||||| | | ||| ||||||| || || | Sbjct 13787 A-GAATTCTGCATTATGCAAAGACCAATTTTTTAAT--TTAATATTTTTTTCCTCCTCGA 13843 Query 1648 GATATTCTTTATAGCTGCTATTTGGTCCTTTATTGCAGAGGAAGATAGTGGGTATTCCAC 1707 | | |||||||||||| | | || || |||||| | |||||| || ||||| |||| Sbjct 13844 GGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCAC 13903 Query 1708 CTTTAATCATGACTGGCTTTCCGTATTTCGTGTTGCTTTGCCAGTCTCTTTGGGCCCCCA 1767 | || ||| | || ||| |||||||||| ||||| ||| | ||||||||||||| Sbjct 13904 CCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCA 13963 Query 1768 TGAATTCTTTAAAATGCTTTAGGTAGTGCGGGTCGACGTCATCAATGACGTTGTACCAAG 1827 | || |||||||| |||||||| || ||||| ||||||| |||||||| ||| ||||| | Sbjct 13964 TAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGG 14023 Query 1828 CTTCATTATTGTACACTCTCGGGCTCAGATCCAGATGACCGCATAGATAATTGTGTGGGC 1887 | | ||| || | | | ||| ||| | |||||||||||| ||||| ||||| | Sbjct 14024 CATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTC 14083 Query 1888 CTAAAGACCTGGCCCACATTGTCTTGCCCGTACGACTATCACCCTCAATGACAATACTCT 1947 ||||||| || |||||| |||||| || || | | |||||||||||||||||||||| Sbjct 14084 CTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCT 14143 Query 1948 TGGGTC-TCCACGGCCGCGCAGCGGCATCCCTTACATTCTCAGACACCCAGACCTCAAGT 2006 |||||| | | |||||||||||||||||||| ||||| |||| ||||| ||||| Sbjct 14144 TGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA-- 14201 Query 2007 TCCTCTGGAACTTGATCGAATGAAGAAGAcaaaaaaggacaaacaaaaacctctaaagga 2066 ||| | ||| |||||| | |||||||| |||| || || |||| Sbjct 14202 -----------TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTC---AGGA 14246 Query 2067 -ggtgca--aaaaTCCTATCTAAATTAGAATTCAAATTATGAAATTGGAAAATATAATCT 2123 || ||| || || | |||||| || | | | ||||||| |||| ||||| || || Sbjct 14247 GGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACT 14304 Query 2124 TT--TGGGAGTTTTTCCCTTATTATACTAAGTGCTGCTTCTTTAGAACCTGCGTTTAGGG 2181 || ||| | |||||| || || ||| ||| ||| |||| | || || ||| | Sbjct 14305 TTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACG 14364 Query 2182 CCTCTGCTGCTGCATCATTTGCTGTCTGTTGACCTCCTCTAGCAGATCGTCCATCGATCT 2241 | ||||| | | ||||||||| ||| ||| ||||||||||||||||||||||||||| | Sbjct 14365 CTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTT 14424 Query 2242 GAAACTGACCCCAGTCAATGTAATCACCGTCTTTCTCGATGTAGGACTTGACATCGGAGC 2301 |||| | |||||||| ||||||||| ||||||| ||||||| ||| ||||| || Sbjct 14425 GAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAG 14484 Query 2302 TGGACTTAGCTCCCTGGAAGTTTGGGTGGTATTGTGTGGAGGTATTAGGGTGAGTGACAT 2361 || ||||| |||||||||||||||||| ||| |||||||| || ||| || Sbjct 14485 ATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAGGATGGATGATAT 14544 Query 2362 CGAAATGTCTAGGGTTTCTGAACTGGCATTTACCTTTGAATTGGATGAGCGCGTGGATAT 2421 |||| |||||||||||||| || || || |||| |||||| || || || ||| ||| Sbjct 14545 CGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTAT 14604 Query 2422 GCAGAGACCCATCTTGGTGTTTTTCTTGTGATACTCTGATAAATAATTTGTCAGATGGAC 2481 | | |||||| |||||||||||||| | ||||| ||| | ||| | || |||| Sbjct 14605 GAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCT--AAAACAGTTTATTTGAAGGAC 14662 Query 2482 ATGAAA--TGTTTCGAAGGAGTTCGAGCATATGCTCTTTTGGTATTGGGCATTTTGGGAA 2539 | |||| |||||| | | | || | || || ||||| || | || |||||||| || Sbjct 14663 AAGAAACCTGTTTC--AAGTGCTCTAAGATTTGATCTTTAGGAAGAGGACATTTTGGAAA 14720 Query 2540 AGTGAGAAATATATTTTTTGCCTTAACTTGGAAT 2573 || |||||||| ||||| | || || |||||| Sbjct 14721 TGTAAGAAATATGTTTTTAGAATTTACCTGGAAT 14754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8662481245144