Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005032.1 Length=2755 Score E Sequences producing significant alignments: (Bits) Value seq19028 282 7e-73 >seq19028 Length=31091 Score = 282 bits (312), Expect = 7e-73 Identities = 525/767 (68%), Gaps = 28/767 (4%) Strand=Plus/Plus Query 1611 GTGAGGGTGATGAATTCTGCATTTTTTAGTGCCCAGTCTTTGAGTGGAGAATTTTTATCC 1670 |||| |||| |||||||||||| | | | ||| | ||| | | | |||||| ||| Sbjct 13777 GTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCC 13836 Query 1671 TCATCCAAGTACTCTTTATACGACGATGTAGGTCCTGGATTGCATAGGAAGATTGTTGGG 1730 || || | | |||||||||| || ||||| || |||||||| | ||||||||| || Sbjct 13837 TCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGT 13896 Query 1731 ATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGG 1790 |||||||| || || | | || | ||||| ||| ||||| ||| | |||||| Sbjct 13897 ATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGG 13956 Query 1791 GCCCCCATAAACTCTTTAAAATGCTTTAGATAGTGGGGGTCGACGTCATCAATGACGTTG 1850 |||||||||||||||||||| ||||||||||| || || ||||||| |||||||| ||| Sbjct 13957 GCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTA 14016 Query 1851 TACCAGGCATCATTACTGTACACCTTTGGACTAAGGTCCAGATGTCCACACAAATAATTA 1910 |||||||||| ||| || | || | | | || | ||| || || | |||||| Sbjct 14017 TACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTA 14076 Query 1911 TGTGGACCCATAGACCTAGCCCACATCGTCTTCCCCGTCCTGCTATCTCCTTCTATGACA 1970 ||||| || | ||| || |||||| |||||||| || || || || || |||||| Sbjct 14077 TGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACA 14136 Query 1971 ATACTCATGGGTCTCCCATTG-CGCGCAGCGGCATCCCTAACATTCTCGGAAACCCAGTC 2029 |||||| |||||| || | ||||||||||||||||||||||| || | ||||| Sbjct 14137 ATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCA 14196 Query 2030 TTCAAGTTCTTTTGGAACTTGGTCGAAAGAAGAAGAAAGAAAAGGACAACGAAAAACCTC 2089 |||| | || ||| |||||| || |||||||| | | || || Sbjct 14197 CTCAA--------------TTGTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTC 14242 Query 2090 TAAAGGA-GGTGCA--AAGATCCTATCTAAATTGGCATTTAAATTATGAAATTGTAAAAC 2146 |||| || ||| || || | |||||| || | | || ||||||| |||| || | Sbjct 14243 ---AGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAG 14299 Query 2147 AAAATCTTTTGGAGCTAACTCCCTAATTACATTAAGAGCCTCCGACTTACTTCCTGTGTT 2206 ||| | | ||| | || ||||| | | ||| || || | | || ||| Sbjct 14300 AAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTC---TTCAATTGATGTAGC 14356 Query 2207 AATT---GCTTTGGCGTAAGCATCATTGGCTGATTGTTGACCCCCTCTAGCAGATCTTCC 2263 | || |||| || | ||||||| | || ||| ||| ||||||||||||| ||| Sbjct 14357 ACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCC 14416 Query 2264 ATCGATCTGAAACTCACCCCATTCGAGGGTGTCTCCGTCCTTATCAATATATGATTTGAC 2323 |||||| ||||| | ||||| ||| | || | ||| || | || ||| || || Sbjct 14417 ATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAAC 14476 Query 2324 GTCGGAGCTTGATTTAGCTCCCTGTATGTTTGGATGGTAATGTGCTG 2370 || || ||||||||| || | |||||| |||| ||||| || Sbjct 14477 ATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGT-ATGTGGTG 14522 Score = 190 bits (210), Expect = 4e-45 Identities = 268/371 (72%), Gaps = 14/371 (4%) Strand=Plus/Plus Query 979 CATACAGAGAACGCTTTACTGTTGTATATGGCATGTACTCATGCCAGTAATCCAGTGTAT 1038 ||||| || || || || ||||||||| | |||||||| |||||| || ||| Sbjct 13084 CATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1039 GCTACTTTGAAAATCAGAATCTATTTCTATGATTCTGTTCAAAATTAATAAATATTGAAT 1098 |||| ||| || | | ||||| ||||| ||| ||||||||||||||||||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1099 TTTATTATATGAGAAAATTC---TACATCTATTGTTTG---AATTACATTGTACATCACA 1152 |||||| |||| | ||| |||||| | |||||| |||||||||| | | ||| Sbjct 13201 TTTATTTCATGATA---TTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACA 13257 Query 1153 TGATCGACTGCCCTAATTACATTGTTTATGCTAATAACCCCTAAACTATACAAATACTTC 1212 | || || || ||||| | |||||| || |||||||| ||||| | | ||| | ||| Sbjct 13258 TTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTC 13317 Query 1213 AT-ACACTGATATTTAAATACTCTTAAGAAATGCCAAGTCTGAGGATGTAAATGAGTCCA 1271 || |||| || |||||||||||||||||||| | ||| ||||| ||||| |||||| Sbjct 13318 ATTACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1272 GATTTTGCAGATCAGAAAACATTGATGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAA 1331 ||| ||| || | || ||| || || | || | |||||||||||||||||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1332 CTGTATTTGTA 1342 | ||||||| Sbjct 13437 TCGAATTTGTA 13447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8704066273278