Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005338.2 Length=2761 Score E Sequences producing significant alignments: (Bits) Value seq19028 230 4e-57 >seq19028 Length=31091 Score = 230 bits (254), Expect = 4e-57 Identities = 297/406 (73%), Gaps = 3/406 (1%) Strand=Plus/Plus Query 1597 GAACAATGGCTGTTCGAGGGTGATGAAGACCGCATTCTTGTAAGCCCACTCCTTCAATGA 1656 ||| ||||| ||| || |||| ||| | ||||| | ||| ||| | || ||| Sbjct 13764 GAATAATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTT 13823 Query 1657 TTCGTTCTGTTCCTCATCAAGGAACTCTTTATAGGACGAACGTGGTCCTGGATTGCAAAG 1716 || | |||||| || ||||||||||||||| ||| || || |||||||| | Sbjct 13824 AATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAA 13883 Query 1717 AAAGATGGTGGGTATCCCA-CCTTTAATTTGAGTGGGCTTACCGTATTTGATGTTGCTTT 1775 ||||| || ||||||||| |||||| || | || ||| |||||||| | ||||| Sbjct 13884 GAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTT-CCGTATTTTACCTTGCTGG 13942 Query 1776 GCCAGTCCATCTGGGCCCCCATAAACTCTTTAAAATGCTTTAGATAATGCGGATCAACGT 1835 ||| | | ||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 13943 ACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGT 14002 Query 1836 CATCAATGACGTTATACCAAGCATCATTTGAAAATATCTTAGGGCTAAGATCCAGGTGTC 1895 |||||||| ||||||||| |||| ||||||| | || ||| | | ||| | || | Sbjct 14003 TATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGAC 14062 Query 1896 CACACATGTAATTATGGACTCCTAATGACCGTGCCCATAACGTCTTCCCTGTTCTTGTTG 1955 | || | ||||||||| |||||| || | |||||| |||||||||||||| | Sbjct 14063 CGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACT 14122 Query 1956 CTCCTTCAACAACGATGCTCATCGGTC-TTCTCGGCCGCGCAGCGG 2000 | || |||| || || ||| | |||| || ||||||||||||| Sbjct 14123 CACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Score = 107 bits (118), Expect = 3e-20 Identities = 190/274 (69%), Gaps = 10/274 (4%) Strand=Plus/Plus Query 2260 ACCTCCTCTAGCAGATCGTCCGTCGATCTGAAATGTTCCCCAGTCGACGTAATCACCGTC 2319 ||||||||||||||||||||| ||||| ||||| | ||||||||| |||||||| ||| Sbjct 14396 ACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTC 14455 Query 2320 CTTGGTGATGTAGGATTTGACATCAGATGAGCTCTTTGCTCCCTGGACATTTCCATGGAA 2379 || | |||||| || ||||| || || || || |||| ||| ||| | Sbjct 14456 TTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGTA 14515 Query 2380 AACCTGT-GTGC---TATGAGGATGGGTAAGGTCGAAATGTCTTGCATTTCGGAACTGGG 2435 ||| |||| ||| ||||||| | | ||||| ||||| | |||| || || | Sbjct 14516 ----TGTGGTGCTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTG 14571 Query 2436 CCTTACCCTTGAACTGGACGAGGGCATGGAGATGCATAGTCCCATCTTGATGTGCTTCTT 2495 |||| || | ||| || | ||||||||| ||| | |||||| || ||| ||||| Sbjct 14572 CCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTT 14631 Query 2496 GTGCCACTCTGATGAACAATTTGTCCGACGGACA 2529 | ||||| | |||| ||| | || ||||| Sbjct 14632 GACAGACTCTAA--AACAGTTTATTTGAAGGACA 14663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8723259363186