Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005347.1 Length=2786 Score E Sequences producing significant alignments: (Bits) Value seq19028 239 8e-60 >seq19028 Length=31091 Score = 239 bits (264), Expect = 8e-60 Identities = 467/686 (68%), Gaps = 23/686 (3%) Strand=Plus/Plus Query 1653 ATTCTTCGCCTCTTCTAGGAATTCTTTATATGAGGATGTTGGGCCTGGATTGCAGAGGAA 1712 ||| || |||| || ||||| |||||||| ||| || || || |||||||| | ||| Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1713 GATAGAGGGAATTCCGCCTTTAATTTGAATTGGCTTCCCGTACTTTGTGTTGCTTTGCCA 1772 ||| | || || || || || || | | ||| | ||||| ||| ||||| ||| Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCA 13946 Query 1773 GTCCCTCTGGGCCCCAAAGAATTCTTTCCAGTGCTTTAGATAGTGCGGGTCGACGTCATC 1832 | || |||||||| | || ||||| ||||||||||||| ||||| ||||||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1833 AATGACGTTATACCAAGCATCATTAGAATAAACCTTTGGACTTAAGTCTAAATGACCACA 1892 ||||| ||||||||| |||| ||| ||||||| || | | || ||||||||||| || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1893 TAAGTAATTATGTGGCCCTAATGACCTAGCCCAAACAGTTTTGCCGGTACGACTATCGCC 1952 || |||||||||||| ||||| || || ||||| | || || || || | | || || Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1953 CTCTACTACAATACTATTCGG-CCTCCACGGCCGCGCAGCGGCACCCATGACATTCTCAG 2011 ||| | |||||||| || || | | | ||||||||||||||| || | ||||| |||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAG 14186 Query 2012 ACACGCACTCTTCAAGTTCTTCTGGAACTTGAGTAAAAGAAGACGAAAGAAAAGGAGAAA 2071 | || |||| ||| | || ||||| || ||||||| || Sbjct 14187 CTGCCCAGCACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTAA 14232 Query 2072 CATAAGGAGCTGG-GGGCTCTTGAAAAATCCTATCTAAATTAGTTTTTAAATTATGATAT 2130 ||||||| | || ||| | || || || | |||||| || | || |||||||||| Sbjct 14233 CATAAGGTTCAGGAGGGGGCATG-AATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 2131 TGAAAAATAAATTCTTTAGGGAGTTTCTCCCTAATAATAGCCATAGCGGCTTCAGCGGAA 2190 ||||| | ||| | | || | ||| || |||||||||| | || ||||| || Sbjct 14292 TGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGAT 14351 Query 2191 TCTGCATTTAAGGCCTCTGCTGCAGCGTCGTTAGCATTTCGACAGCCTCCCCTAGCACTT 2250 ||| |||| || ||||| | | || || | | | | ||||| |||||| | Sbjct 14352 GTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGAT 14411 Query 2251 CTGCCGTCGACCTGGAATACCCCCCATTCAAGGGTG---TCTCCGTCCTTGTCGATGTAG 2307 | || |||| || || ||||| || |||| || | ||| || ||||||| Sbjct 14412 CGTCCATCGATTTGAAAATTGCCCCAGTC---GGTGTAATCACAGTCTTTCGCGATGTAT 14468 Query 2308 GACTTGACGTCGGAGCTTGATTTAGC 2333 ||| || || || ||||||||| Sbjct 14469 TTCTTAACATCTGAAGATGATTTAGC 14494 Score = 203 bits (224), Expect = 6e-49 Identities = 370/540 (69%), Gaps = 35/540 (6%) Strand=Plus/Plus Query 964 GAATCATACTGAGAATGCTTTGTTGCTGTATATGGCATGTACTCATGCCTCTAACCCTGT 1023 || ||||||||| ||||| |||||| ||||| | |||||||| ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTTG---TATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1024 GTATGCTACGCTTAAGATACGCATCTATTTATATGATGCCGTTACGAATTAATAAAGATT 1083 ||| ||| | | | ||||| ||||| ||||| || | |||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1084 GAATTTTATTTCATGAGTTTCCATAACGGAAATCGTATTTACAAGTACAACATATAACAC 1143 |||||||||||||||| ||| | || | || | ||| |||| |||| || Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1144 ATGATCAACTGCTCTAATTACATTATTGATAGAAATTACACCTAAATTATTCAAATACTT 1203 || || || |||||||| | ||| || ||| ||| |||||||| | ||| | || Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1204 CAAAACTTGGAACCTAAATACCCTTAAGAAAAGACCAGTCTGAGGCCGTAAGGTCGTCCA 1263 || || | || ||||||| |||||||||| ||| |||| ||||| |||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1264 GACCTTGAAGTTGAGAAAACATTTGTGAATCCCCAGTGCCCTCCTGAGGTTGTGATTGAA 1323 || |||||||||||| ||| |||||||| |||| || |||| |||||||| ||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1324 TCGTATTTGGAGTGTGAGGATGTCTTGGTTCATGTTGAA-----TGGCCTGATGTCGTGG 1378 ||| ||||| | | || ||||| ||| ||| ||| ||| |||| | |||| Sbjct 13437 TCGAATTTGTATTTCGATTATGTC--GGT---TGTCGAATTTGTTGGTCTGAGATTGTGG 13491 Query 1379 TTTGTTATCGTGAAATAGAGGGGATTGTT--TATCTCCCATATA------------AAA- 1423 || ||| ||||||| | | | | | ||| ||||| ||| ||| Sbjct 13492 TTGAGGATCTTGAAATATA-GAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAAC 13550 Query 1424 ------ACGCCATTCTTTGCTTGAAGAGCAGTGATGTGTTCCCCTGTGCGTGAATCCATG 1477 ||||||||| | ||||| |||||||||||| ||||||||||||| ||||||| Sbjct 13551 GACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATG 13610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8799938538195