Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005635.1 Length=2728 Score E Sequences producing significant alignments: (Bits) Value seq19028 192 1e-45 >seq19028 Length=31091 Score = 192 bits (212), Expect = 1e-45 Identities = 304/432 (70%), Gaps = 8/432 (2%) Strand=Plus/Plus Query 1589 GAAGAGTGGTTCTTTGAGGGTGTAGAATTCCGCATTTTTTGAAGCCCACACCTTTAGCGA 1648 ||| | ||||| | ||| |||||||||||| ||||| | ||| ||| |||| Sbjct 13764 GAATAATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTT 13823 Query 1649 CGCATTATCAGCTTCGTCCAAGTACTCTTTATAAGAGGATTTGGGACCTGGGTTACAGAG 1708 ||| | | || || | | |||||||||| ||| | ||||| || || || | Sbjct 13824 AATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAA 13883 Query 1709 AAAGATGGTGGGGATTCCACCTTTAATGTGTGTGGGCTTTCCGTATTTTACATTTGACTG 1768 ||||| || || || ||||| || || | | ||| ||||||||||||| || ||| Sbjct 13884 GAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT--GCTG 13941 Query 1769 --CCAGTCTCTTTGCGCGCCCATGAATTCTTTGAAATGTTTCAAATAATGTGGATCAACG 1826 ||| | ||||| || ||||| || ||||| || || || | |||||| ||||| ||| Sbjct 13942 GACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACG 14001 Query 1827 TCATCGATGACGTTATACCATGCCTCGTTAGAGAAAATCTTATCGTTCAGATCCAAATGG 1886 | ||| |||| ||||||||| || | || || |||| |||| |||| ||| ||||| Sbjct 14002 TTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGA 14061 Query 1887 CCGCAAAGATAATTATGAGGACCCAATGCTCTTGCCCACATGGTTTTACCCGTCCGACTA 1946 ||||| || |||||||| || || || | |||||||||| || || || || | | Sbjct 14062 CCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGAC 14121 Query 1947 TCACCTTCAATCACTATACTTATGGGTC--TCTCCGGCGCGCAGCGGGAT--CTTACATT 2002 ||||| ||||| || ||||| |||||| | | |||||||||| || || ||||| Sbjct 14122 TCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATT 14181 Query 2003 TTCTGAAGCCCA 2014 ||| | ||||| Sbjct 14182 TTCAGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8617697368692