Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005807.1 Length=2784 Score E Sequences producing significant alignments: (Bits) Value seq19028 192 1e-45 >seq19028 Length=31091 Score = 192 bits (212), Expect = 1e-45 Identities = 250/344 (73%), Gaps = 4/344 (1%) Strand=Plus/Plus Query 1704 GACGTTGGGCCTGGATTGCAGAGGAAGATTGTTGGGATACCTCCTTTAATTTGAATTGGT 1763 || || || || |||||||| | ||||||||| || || || || || || | | || Sbjct 13861 GAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGC 13920 Query 1764 TTCCCGTACTTGGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGC 1823 | ||||| || ||||| ||| | |||||||||||||| ||||||||||||||| Sbjct 13921 CTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGC 13980 Query 1824 TTTAGATAGTGGGGATCCACGTCATCAATGACGTTGTACCAGGCCTCGTTGCTGTAAACC 1883 |||||||| || ||||| |||| |||||||| ||| |||||||| | || |||| Sbjct 13981 TTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATT 14040 Query 1884 TTGGGGCTTAAGTCAAGATGGCCGCAAAGGTAGTTATGACGTGGACTCAAAGACCTGGCC 1943 || | || || | ||| ||||| ||||| |||| |||| | ||||| || ||| Sbjct 14041 TTATTATTCAAATCTAAATGACCGCATAGGTAATTAT---GTGGTCCTAAAGATCTTGCC 14097 Query 1944 CACATGGTCTTCCCTGTCCTGCTATCCCCTTCTATCACAATGCTAATGGG-CCTCCATGG 2002 ||| ||||||||||| || || || || || ||||| || |||| | | |||| Sbjct 14098 CACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGG 14157 Query 2003 CCGCGCAGCGGAATCCCTGACGTTCTCGGCAGCCCATCCCTCAA 2046 ||||||||||| |||||| || || || || ||||| | ||||| Sbjct 14158 CCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA 14201 Score = 145 bits (160), Expect = 1e-31 Identities = 255/368 (69%), Gaps = 5/368 (1%) Strand=Plus/Plus Query 985 CATACTGAAAATGCTTTGTTATTGTATATGGCGTGTACTCATGCCAGTAATCCAGTGTAT 1044 |||||||||||||| ||||| |||||| | |||||||| |||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1045 GCCAC-ATTAAAAATCAGAGTGTATTTCTACGATTCAGTACAAAATTAATAAAGCTTAAA 1103 || || | || | ||| ||||| || || ||| ||||||||||| || || Sbjct 13141 TGTACTATGAGAACACGCAGT-TATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1104 TTTTATATCTGTAAATTGTTGTACACATTCAGTTCCTTCGAATACATTATATAATACATG 1163 |||||| || | ||| ||||| | ||| || | |||||| ||||||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1164 ATCTACTGCTCTAATTACATTGTTAATTGATATTACACCCAAATTATCTAAGTACTTCAA 1223 ||||| |||||||| | ||||||||| || ||||| || ||||| | |||| Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1224 CACTTGTGTCCTAAATACCCTCAAGAAATGCAAAGTCTGAGGATGTAAGCGAGTCCAAAT 1283 || | ||||||| || |||||| | ||| ||||| |||| ||||||| || Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1284 CTTGAAAGAGAGGAAGCACTTGTGTATGTGCAGTTGATTCCTGAGGTTGTGGTTGAATTG 1343 |||||| |||||| ||||| | | ||||| ||||| ||||||||||||||| | Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1344 TATCTGTA 1351 || |||| Sbjct 13440 AATTTGTA 13447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8793540909305