Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005812.1 Length=2752 Score E Sequences producing significant alignments: (Bits) Value seq19028 304 2e-79 >seq19028 Length=31091 Score = 304 bits (336), Expect = 2e-79 Identities = 738/1122 (66%), Gaps = 79/1122 (7%) Strand=Plus/Plus Query 955 TCATACTGAGAATGCTTTGCTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTA 1014 ||||||||| ||||| ||| |||||||| | |||||||| ||||||||||| || Sbjct 13083 TCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1015 TGCAACACTTAAGATTAGAATTTATTTTTATGACAATGTAACTAATTAATAAATGTTGAA 1074 | || | | | | | |||||||||||| | |||| | ||||||||||| ||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1075 TTTTATTATATGACATTGGTCTACATAACTTGTATTTTCCAATACATCCCACAATACATA 1134 ||||||| |||| ||| ||||| ||| | || | ||||| | ||||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1135 ATCAGCTGCGCGTATTACATTGTTAATTGAAACTATACCTAAGTTATTCAAATATTTCAT 1194 || | || | || | ||||||||| || | |||||| | ||| ||||||| Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1195 -ACATTGATTTTTAAATACTCTTAAGAAATGCCAGGTCTGAGGTTGTAAAGGAGTCCATA 1253 ||| || ||||||||||||||||||| | ||| |||| ||||| |||||| | Sbjct 13320 TACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1254 TTCTGAAGATCAGGAAACACTTGTGAATCCCCAACGCCTTCCTGAGGTTGTGGTTGAATT 1313 | ||||| | |||||| ||||||| || ||||||| ||||||||||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1314 GGATCTGTATCTCCAAATAGTCGTTGTTGTCG--TTGAATGGTTTGCTGTTGTGCTTCAG 1371 | || ||||| || | |||| ||||||| || |||| || ||||| || || Sbjct 13439 GAATTTGTATTTCGATTATGTCG--GTTGTCGAATTTGTTGGTCTGAGATTGTGGTTGAG 13496 Query 1372 CACCTTGAAATACAGGGG-ATTTGGAACTTCCCATATAT-------------------AC 1411 | ||||||||| || | | | |||||| |||| | Sbjct 13497 GATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAG 13556 Query 1412 ACGCCATTCTGCGCTTGAGCTGCAGTAATGGTTTCCCCTGTGCGTAAATCCATATTTGTG 1471 ||||||||| |||||| ||||| ||| |||||||||||||| |||||| Sbjct 13557 ACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAGA 13616 Query 1472 ACAATTAATGTTTACGTAATAC-GAACAGCCACAATCTAAGTCTACTCTGCGTCTTCTTG 1530 ||| |||| ||| | |||| ||||| |||||| | ||||| || |||||||| Sbjct 13617 ACAGCTAATATTTTTG-AATATTGAACATCCACAAGGCAGGTCTAGTC---GTCTTCTTC 13672 Query 1531 GTAttttt---ttCTT------------TGCAATT--------TTATGTTGTA------C 1561 |||| | ||||| || || | || ||||| | Sbjct 13673 TGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTC 13732 Query 1562 TTTG-----ACTGGTACAA---TT-------GTAGAGTGGCTGTTGGAGGGTGACGAATT 1606 | || | ||| | || || | | | ||| ||| || |||| ||||| Sbjct 13733 TATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATT 13792 Query 1607 CTGCATTTTTCAAAGCCCANNNNNNNNNNNNNNNNNNNNNNNGTTCGTCCAAAAACTCCT 1666 ||||||| | ||||| ||| || || | ||||| | Sbjct 13793 CTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTT 13852 Query 1667 TAAAAGAGGAAGATGGACCAGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTT 1726 || | ||||| |||||||||||||| | |||||| || || || ||||| || || | Sbjct 13853 TATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCT 13912 Query 1727 GAATTGGTTTACCGTACTTTGTATTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCTT 1786 | || | ||||| ||| ||||| ||| | || ||||||||||| || |||| Sbjct 13913 TTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTT 13972 Query 1787 TTAAGTGCTTTAGATAATGCGGATCTACGTCATCAATGACGTTATACCAAGCATCATTGC 1846 | ||||||||||||||||||||||| |||| |||||||| ||||||||| |||| ||| Sbjct 13973 TAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTG 14032 Query 1847 TGTACACTTTTGGGCTAAGGTCTAGATGTCCACACAAATAATTATGAGGGCCCAATGATC 1906 || | ||| | | |||| ||| || || | |||||||| || || || |||| Sbjct 14033 AATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATC 14092 Query 1907 TGGCCCACATTGTTTTGCCGGTTCTAGATTCACCTTCAATCACCATTCCTATGGGTC-TC 1965 | |||||| ||| || || |||||||| ||||| ||||| || || | |||||| | Sbjct 14093 TTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTT 14152 Query 1966 CACGGCCGCGCAGCGGCATCACATACATTTTTCTCAGCCCAG 2007 | ||||||||||||||||| | ||||||| | |||||| Sbjct 14153 AATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAG 14194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8694469728324