Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005842.1 Length=2763 Score E Sequences producing significant alignments: (Bits) Value seq19028 262 7e-67 >seq19028 Length=31091 Score = 262 bits (290), Expect = 7e-67 Identities = 453/652 (69%), Gaps = 21/652 (3%) Strand=Plus/Plus Query 1622 GCATTCTTCAAAGCCCAGTTTTTAAGTGCAAAATTCTTGTCTTCATCCAAGAACTCTTTA 1681 ||||| | ||||| ||| ||||| | | || ||| || || || || | |||||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1682 TAACTGGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGA 1741 || ||||| | || || |||||||| | |||||| || || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1742 ACTGGCTTCCCGTACTTTGTATTTGATTG-CCATTCTCTTTGGGCCCCCATGAATTCCTT 1800 || ||| | ||||| ||| || | | | ||| | |||||||||||||| || || || Sbjct 13915 ACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1801 AAAGTGCTTTAGATAGTGGGGATCGACGTCATCAATGATGTTGTACCAGGCATCATTACT 1860 ||||||||||||||| || |||||||||| |||||||||||| |||||||||| ||| Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGA 14033 Query 1861 GTAGATTTTTGGGCTAAGGTCTAGATGACCACATAGATAATTATGTGGACCCAACGACCT 1920 || ||||| | | |||| |||||| ||||| ||||||||||| || || || || Sbjct 14034 ATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCT 14093 Query 1921 AGCCCACATTGTTTTACCAGTACGACTATCACTCTCAATAACAATACTTATGGGCC--TA 1978 |||||| ||| || || || | | |||| |||||| |||||||| |||| | || Sbjct 14094 TGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTA 14153 Query 1979 ATGGGCCGCGCAGTGGTATCGGCAATATTTTCGCAAGCCCACTCTTCAAGTTCTACTGGA 2038 || |||||||||| || ||| || |||||| ||||| |||| Sbjct 14154 AT-GGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA----------- 14201 Query 2039 ACTTGATCGAATGAAGAGGAAGAAAAAGGTGAAACATAAGGAGCTGG-TGGCTCCTGAAA 2097 ||| | ||| ||||| || |||||| ||||||||| | || || | |||| Sbjct 14202 --TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAAT 14258 Query 2098 ATATCTATCTAAATTTGAATTTAAATTATGAAATTGAAGTAGAAAGTCTCTAGGAGCTTT 2157 || || |||||| |||| | || ||||||| |||||| |||||| | | || ||| Sbjct 14259 AT-TCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTT 14317 Query 2158 CTCCTTCAGTATATTGAGGGCCTGAGCTTTGGACCCTGAATTGATTGCCTCGGCATATGC 2217 || | | ||| || || | | | || | | | | || || ||| || | Sbjct 14318 TTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATAC 14377 Query 2218 GTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCGTCCATCGACTTGGAAA 2269 || || | | || ||||||||||||| ||||||||||||| ||| ||| Sbjct 14378 ATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAA 14429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8729657059822