Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005843.1 Length=2606 Score E Sequences producing significant alignments: (Bits) Value seq19028 210 4e-51 >seq19028 Length=31091 Score = 210 bits (232), Expect = 4e-51 Identities = 572/862 (66%), Gaps = 44/862 (5%) Strand=Plus/Plus Query 1457 GAATTTTGCATTGTGGAGGGTCCAAGCTTTTAGTGCTGCATTTTCCTCTTTTTCAAGGGA 1516 ||||| |||||| || | | |||| ||||| | ||||| || | || ||| | Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAA 13847 Query 1517 ACATTTATAGCTGGCTCCCTCTCCTGGATTGCAGAGCACGATTGATGGTATCCCACCTTT 1576 ||||||||||| || |||||||| | | ||||| ||||||||||| || Sbjct 13848 CTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTT 13907 Query 1577 AATTTGAACTGGCTTCCCGTATTTGCAGTTGGACTG--CCAGTCCTTTTGGGCCCCAATC 1634 || | || ||| | |||||||| ||| ||| ||| | |||||||||| || Sbjct 13908 TATCTTTACAGGCCTTCCGTATTTTACCTTG--CTGGACCAATTGCTTTGGGCCCCCATA 13965 Query 1635 AGCTCTTTCCAATGTTTCATCTTTAAATATTGCGGAGTGACGTCATCAATGACGTTGTAC 1694 | |||||| | || ||||| ||| |||||| ||||| |||||||| ||| ||| Sbjct 13966 AACTCTTTAAAGTG------CTTTAGATAATGCGGATCGACGTTATCAATGATGTTATAC 14019 Query 1695 TCCACATCATTTGAGTAAACCCTAGGATTGAAATCCAAGTGTCCACTCAAATAATTATGT 1754 ||| |||||| |||| || ||| ||||| || || || | | ||||||||| Sbjct 14020 CAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGT 14079 Query 1755 GGTCCTAAAGCACGAGCCCACATCGTCTTTCCTGTCCTCGAATCACCCTCGATGATTATA 1814 |||||||||| | |||||| ||||| ||||| || || |||||||| |||| ||| Sbjct 14080 GGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATA 14139 Query 1815 CTAATAGGTC-TCTCCGGCCGCGCAGCGGCACCCCTACCAAAATAATCATCAGCCCACTC 1873 || | |||| | ||||||||||||||| |||| || || ||| | ||||| Sbjct 14140 CTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---AACATTTTCAGCTGCCCA--- 14193 Query 1874 TTGCATCTCGTCCGGAACGTTCGTGAAGGAGGAGAGTGGAAACGGAGGAACCCATGGTTC 1933 ||| ||| || || ||||||| || ||| ||| ||| | ||||| Sbjct 14194 --GCA-CTC------AA--TTGTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTC 14242 Query 1934 CGGAGCCTTAGCGAATATCCTGTCTAAGTT----ACTAGACAGGTTGTGATATTGAAAAA 1989 |||| |||||| | ||||| || |||| | || ||||||||||| | Sbjct 14243 AGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATA----TTATGATATTGAAATA 14298 Query 1990 GAAACTCTTTGGGGAGCTTCTCTTTAATAATTCGCATGGCTTCTTCTTTCGAGGACGCAT 2049 |||||| | || | || ||| ||||||| | |||||||| | || | ||| Sbjct 14299 GAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCAC 14358 Query 2050 TTAGGGCCTCTGCGGCAGCGTCGTTAGCTGTTTGCTGACCTCCTCTAGCAGATCTTCCGT 2109 ||| || ||||| | | || || | ||| || ||||||||||||||||| ||| | Sbjct 14359 TTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCAT 14418 Query 2110 CGATCTGGAATTCTCCCCATTCCAATGT-ATCTCCATCCTTGTCGATGTAGGACTTGACG 2168 |||| || || | ||||| | | ||| ||| | || || ||||||| ||| || Sbjct 14419 CGATTTGAAAATTGCCCCAGT-CGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACA 14477 Query 2169 TCGGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGT-TGGGGA 2227 || || ||||||||| || | ||| || ||| ||||| || || || | ||| Sbjct 14478 TCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG--CTAGTATTAGGA 14534 Query 2228 T--ACCAGGTCGAACTGTCTTTGATTCGTGATTTGGATTTTCCCTTCGAACTGCATAAGC 2285 | | | ||||| ||||| | || | | ||| || |||||||| || ||||| Sbjct 14535 TGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGG 14594 Query 2286 ACGTGGAGATGATGTTCCCCAT 2307 | ||| |||| |||||||| Sbjct 14595 GCATGGCTATGAAATTCCCCAT 14616 Score = 120 bits (132), Expect = 5e-24 Identities = 236/341 (69%), Gaps = 21/341 (6%) Strand=Plus/Plus Query 868 ACTCATGCCTCTAACCCTGTGTATGCTACTCTTAAGATCCGGATCTATTTTTATGATTCG 927 |||||||| ||||| ||||| ||| |||| | | | || | ||||||||||| Sbjct 13117 ACTCATGCATCTAATCCTGTATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGT 13176 Query 928 GTGTTAAATTAATAAATTTTGAATTTTATTGAATAATTCTCAAGTACA-----TGATT-- 980 || | |||||||||||| |||||||||||| || || ||||||||| || || Sbjct 13177 GTATCAAATTAATAAATATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGC 13236 Query 981 TACATACCATCTGTCTGTTGCGAAGCGAACAGCTCTAATTACATTATTAATGCAAATAAC 1040 | || ||| || | | | | ||||||||||| | ||| ||||| | |||||| Sbjct 13237 TCAATTACAT-TGAATAATACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAAC 13295 Query 1041 GCCTAATCTATCT--AAATACAATAAGACTAAATATTTAAATCTACTTAAGTAA--GT-C 1095 ||||||| ||| |||| || | || || |||||||| |||||| || || Sbjct 13296 ACCTAATCGGTCTAAAAATTTCATTACACGAA--ATTTAAATACTCTTAAGAAAACGTAT 13353 Query 1096 GTCCCAGAAGCTCGAACTGATGTCGTCCAGATTTGGTAGTTGAGGTACGCTTTGTGTAGA 1155 ||| || | | || || |||| ||| | | |||||||| | |||||||| ||| Sbjct 13354 GTCGGAGGACGT--AAACGA----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGA 13407 Query 1156 CTCAACGCCTTCCTGAGGTTGTGGTTGAACCTTATTTGGAT 1196 ||| ||||||| |||||||||||||| | ||||| || Sbjct 13408 TTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGAATTTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8227437873896